RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 BTDP43251 543 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 GPR12P47775 334 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 CDH12P55289 794 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 NANOS2P60321 138 aaKnown RBP5.1□□□□□ -1.59
LINC00254-201ENST00000563416 TLE2Q04725 743 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 DSC1Q08554 894 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 PKP1Q13835 747 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 TOMM20Q15388 145 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 NAA16Q6N069 864 aaPredicted RBP5.1□□□□□ -1.59
LINC00254-201ENST00000563416 TTC41PQ6P2S7 1318 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 TMEM71Q6P5X7 295 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 MOB2Q70IA6 237 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 ADGRA1Q86SQ6 560 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 HERC6Q8IVU3 1022 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 IQCF1Q8N6M8 205 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 GFM1Q96RP9 751 aaKnown RBP5.1□□□□□ -1.59
LINC00254-201ENST00000563416 ZPBPQ9BS86 351 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 TMEM39BQ9GZU3 492 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 TTC12Q9H892 705 aaPredicted RBP5.1□□□□□ -1.59
LINC00254-201ENST00000563416 ENTPD7Q9NQZ7 604 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 ECHDC1Q9NTX5 307 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 BLOC1S4Q9NUP1 217 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 RAI14Q9P0K7 980 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 IFT80Q9P2H3 777 aaPredicted RBP5.1□□□□□ -1.59
LINC00254-201ENST00000563416 WNT16Q9UBV4 365 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 SLC45A1Q9Y2W3 748 aa5.1□□□□□ -1.59
LINC00254-201ENST00000563416 SRPRBQ9Y5M8 271 aaKnown RBP5.1□□□□□ -1.59
LINC00254-201ENST00000563416 PLXNB2O15031 1838 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 HTTP42858 3142 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 C17orf100A8MU93 164 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 BECN2A8MW95 431 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 HOXC11O43248 304 aaPredicted RBP5.09□□□□□ -1.59
LINC00254-201ENST00000563416 RGS14O43566 566 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 DHX16O60231 1041 aaKnown RBP5.09□□□□□ -1.59
LINC00254-201ENST00000563416 CNPP09543 421 aaKnown RBP5.09□□□□□ -1.59
LINC00254-201ENST00000563416 WEE2P0C1S8 567 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 HNF1BP35680 557 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 PPP3CCP48454 512 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 EGR4Q05215 589 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 TBL3Q12788 808 aaKnown RBP5.09□□□□□ -1.59
LINC00254-201ENST00000563416 ERV3-1Q14264 604 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 FSCBQ5H9T9 825 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 FNBP1LQ5T0N5 605 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 SPATA1Q5VX52 437 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 ARMC9Q7Z3E5 817 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 TBC1D1Q86TI0 1168 aaPredicted RBP5.09□□□□□ -1.59
LINC00254-201ENST00000563416 GPATCH11Q8N954 259 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 TMEM163Q8TC26 289 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 RNFT2Q96EX2 444 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 RIOK1Q9BRS2 568 aaKnown RBP5.09□□□□□ -1.59
LINC00254-201ENST00000563416 DDX4Q9NQI0 724 aaKnown RBP5.09□□□□□ -1.59
LINC00254-201ENST00000563416 PAG1Q9NWQ8 432 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 IL36RNQ9UBH0 155 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 PTGDR2Q9Y5Y4 395 aa5.09□□□□□ -1.59
LINC00254-201ENST00000563416 PLXNA1Q9UIW2 1896 aa5.09□□□□□ -1.6
LINC00254-201ENST00000563416 CENPFP49454 3210 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 CKAP5Q14008 2032 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 FLT1P17948 1338 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 CCDC196A0A1B0GTZ2 297 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 TARSL2A2RTX5 802 aaKnown RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 DDTLA6NHG4 134 aaPredicted RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 LIASO43766 372 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 IDH1O75874 414 aaKnown RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 BAG3O95817 575 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 IGHDP01880 384 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 LCATP04180 440 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 NGFRP08138 427 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 HSPA1AP0DMV8 641 aaKnown RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 HSPA1BP0DMV9 641 aaKnown RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 NAP1L1P55209 391 aaKnown RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 VAMP2P63027 116 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 NUCB1Q02818 461 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 TCP10Q12799 353 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 GPS2Q13227 327 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 SLC12A1Q13621 1099 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 SH2D4BQ5SQS7 431 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 KIAA1161Q6NSJ0 714 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 TEX11Q8IYF3 940 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 SETD9Q8NE22 299 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 DNAAF1Q8NEP3 725 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 HERVK_113Q902F9 699 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 MIB2Q96AX9 1013 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 SERINC2Q96SA4 455 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 BOLA2Q9H3K6 86 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 RWDD1Q9H446 243 aaPredicted RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 JMJD4Q9H9V9 463 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 RIC8AQ9NPQ8 531 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 TLR8Q9NR97 1041 aaKnown RBP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 ATP8A2Q9NTI2 1148 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 AATFQ9NY61 560 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC00254-201ENST00000563416 SELENONQ9NZV5 590 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 ZNF112Q9UJU3 913 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 CNPY2Q9Y2B0 182 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 CLDN16Q9Y5I7 305 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 FRMPD3Q5JV73 1810 aa5.08□□□□□ -1.6
LINC00254-201ENST00000563416 ZNF532Q9HCE3 1301 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 VWA3AA6NCI4 1184 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 A6NLC8 198 aa5.07□□□□□ -1.6
LINC00254-201ENST00000563416 FAM157AC9JC47 383 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms