RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CYP4F2P78329 520 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF662Q6ZS27 426 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 ECHDC2Q86YB7 292 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 DLG3Q92796 817 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 PTCD3Q96EY7 689 aaKnown RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 MYLK2Q9H1R3 596 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 NFKBIEO00221 500 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CLDN4O14493 209 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 DGKGP49619 791 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 ST13P50502 369 aaKnown RBP13.43□□□□□ -0.26
TRAF3-208ENST00000560371 BLKP51451 505 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 HID1Q8IV36 788 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 CKAP2Q8WWK9 683 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 FUBP3Q96I24 572 aaKnown RBP eCLIP13.43□□□□□ -0.266e-6■■■■□ 23.4
TRAF3-208ENST00000560371 PCDHGC4Q9Y5F7 938 aa13.43□□□□□ -0.26
TRAF3-208ENST00000560371 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 OR2AG2A6NM03 316 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ITGA1P56199 1179 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 NEDD8Q15843 81 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ST6GALNAC4Q9H4F1 302 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 PCDHGB3Q9Y5G1 929 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 FZD9O00144 591 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 MFSD11O43934 449 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 BCL10O95999 233 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ITPKAP23677 461 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 PBX3P40426 434 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 OFCC1Q8IZS5 231 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 HEPHQ9BQS7 1158 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 FAM237BA0A1B0GVD1 139 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 WASHC2DQ5SRD0 308 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 CIR1Q86X95 450 aaPredicted RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ST13P5Q8NFI4 369 aaPredicted RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 MAGEE2Q8TD90 523 aaPredicted RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 LMLNQ96KR4 655 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 VPS35Q96QK1 796 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ELL3Q9HB65 397 aaPredicted RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 CD248Q9HCU0 757 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 RGPD2P0DJD1 1756 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 A0A1W2PRU2 124 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 CCNCP24863 283 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 TAS2R41P59536 307 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 AUHQ13825 339 aaKnown RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 NOMO1Q15155 1222 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 C10orf107Q8IVU9 208 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 PLD5Q8N7P1 536 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 TSEN2Q8NCE0 465 aaKnown RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 EQTNQ9NQ60 294 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ROBO1Q9Y6N7 1651 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ABHD14A-ACY1A0A1B0GW23 586 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 FSCN2O14926 492 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 FSBPO95073 299 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 TFPIP10646 304 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 LMO2P25791 158 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 LPIN1Q14693 890 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 NRF1Q16656 503 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 HDDC3Q8N4P3 179 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 SLC4A11Q8NBS3 891 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 KCTD15Q96SI1 283 aaPredicted RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 TRMOQ9BU70 441 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 RACGAP1Q9H0H5 632 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ABCB8Q9NUT2 735 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 COPG2Q9UBF2 871 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ASB3Q9Y575 518 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 EFCAB10A6NFE3 127 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 HNRNPH3P31942 346 aaKnown RBP13.42□□□□□ -0.26
TRAF3-208ENST00000560371 MAPKAPK2P49137 400 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 CACNG1Q06432 222 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 NAE1Q13564 534 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 CCNYL2Q5T2Q4 361 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 KIAA0408Q6ZU52 694 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 HMCESQ96FZ2 354 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 KLHL32Q96NJ5 620 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 OLFM1Q99784 485 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 SLC25A51Q9H1U9 297 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 TRAF6Q9Y4K3 522 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 ICE1Q9Y2F5 2266 aa13.42□□□□□ -0.26
TRAF3-208ENST00000560371 CMPK1P30085 196 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 BST1Q10588 318 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 ARMC4Q5T2S8 1044 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 OR4A15Q8NGL6 344 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 BRINP2Q9C0B6 783 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 ZNF490Q9ULM2 529 aaPredicted RBP13.41□□□□□ -0.26
TRAF3-208ENST00000560371 NPEPPSL1A6NEC2 478 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 BIRC5O15392 142 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 AKT2P31751 481 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 RPIAP49247 311 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 HNMTP50135 292 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 NDST2P52849 883 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 AP1S1P61966 158 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 DSC2Q02487 901 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 SLC34A1Q06495 639 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 AKIRIN2Q53H80 203 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 CPTPQ5TA50 214 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 TPGS2Q68CL5 300 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 LPCAT2Q7L5N7 544 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 CMC1Q7Z7K0 106 aa13.41□□□□□ -0.26
TRAF3-208ENST00000560371 PRCCQ92733 491 aaPredicted RBP13.41□□□□□ -0.26
TRAF3-208ENST00000560371 SEMA6AQ9H2E6 1030 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms