RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ZFR2Q9UPR6 939 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 DMTF1Q9Y222 760 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 MFHAS1Q9Y4C4 1052 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 LAMA5O15230 3695 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 H7C0C1 242 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 PPP1R12AO14974 1030 aaPredicted RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 TM9SF1O15321 606 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 SLC31A1O15431 190 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 HNRNPCL1O60812 293 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 EDF1O60869 148 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 TRIM16O95361 564 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ADRB3P13945 408 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 KRT15P19012 456 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ITGB7P26010 798 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ALDH3A1P30838 453 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ATP5OP48047 213 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 SETDB1Q15047 1291 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 PRKD1Q15139 912 aaPredicted RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 PARP6Q2NL67 630 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ZNF284Q2VY69 593 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 SETMARQ53H47 684 aaPredicted RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 ATXN7L2Q5T6C5 722 aaPredicted RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 SEL1L3Q68CR1 1132 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 NEK5Q6P3R8 708 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ADGRD1Q6QNK2 874 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 PARS2Q7L3T8 475 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 RAB44Q7Z6P3 723 aaPredicted RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 HORMAD1Q86X24 394 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ZNF354CQ86Y25 554 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ARHGAP12Q8IWW6 846 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ZBED8Q8IZ13 594 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 NPWQ8N729 165 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 MFSD2AQ8NA29 543 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 OR2AP1Q8NGE2 309 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 LRRC8CQ8TDW0 803 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 PYROXD1Q8WU10 500 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 TFB1MQ8WVM0 346 aaKnown RBP10.33□□□□□ -0.76
TPM1-212ENST00000558347 CPT1BQ92523 772 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 GATA6Q92908 595 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 SKA1Q96BD8 255 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 KLHL29Q96CT2 875 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 HDAC11Q96DB2 347 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 HMCESQ96FZ2 354 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 TMEM121Q9BTD3 319 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 ACSS3Q9H6R3 686 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 FZD3Q9NPG1 666 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 MCM8Q9UJA3 840 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 NEUROG3Q9Y4Z2 214 aa10.33□□□□□ -0.76
TPM1-212ENST00000558347 POC1B-GALNT4F8VUJ3 575 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 PRAMEF26H0Y7S4 382 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 DFNA5O60443 496 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 FAM155BO75949 473 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 TMCC1O94876 653 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 UNC5CO95185 931 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 PCDH8O95206 1070 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 GSRP00390 522 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 ATXN1LP0C7T5 689 aaKnown RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 ETS1P14921 441 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 NUDT1P36639 197 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 GRK6P43250 576 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 NEK3P51956 506 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 NDST2P52849 883 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 GDF10P55107 478 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 YBEYP58557 167 aaPredicted RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 GPX6P59796 221 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 PPIDQ08752 370 aaKnown RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 BNIP3Q12983 259 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 SERINC3Q13530 473 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 FASTKD3Q14CZ7 662 aaKnown RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 ZKSCAN8Q15776 578 aaPredicted RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 ST3GAL2Q16842 350 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 TMEM259Q4ZIN3 620 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 HHATQ5VTY9 493 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 C4orf22Q6V702 233 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 TBC1D1Q86TI0 1168 aaPredicted RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 PRUNE1Q86TP1 453 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 ZC3H18Q86VM9 953 aaKnown RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 AGGF1Q8N302 714 aaeCLIP10.32□□□□□ -0.76
TPM1-212ENST00000558347 RYBPQ8N488 228 aaPredicted RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 FITM2Q8N6M3 262 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 TMEM145Q8NBT3 493 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 SAP25Q8TEE9 199 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 ADAMTS14Q8WXS8 1223 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 INPP5DQ92835 1189 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 CELF6Q96J87 481 aaKnown RBP10.32□□□□□ -0.76
TPM1-212ENST00000558347 TSGA13Q96PP4 275 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 TMEM237Q96Q45 408 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 MLXIPLQ9NP71 852 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 PHTF1Q9UMS5 762 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 FADS3Q9Y5Q0 445 aa10.32□□□□□ -0.76
TPM1-212ENST00000558347 DMXL2Q8TDJ6 3036 aa10.31□□□□□ -0.76
TPM1-212ENST00000558347 PTPRBP23467 1997 aa10.31□□□□□ -0.76
TPM1-212ENST00000558347 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
TPM1-212ENST00000558347 MTSS1O43312 755 aa10.31□□□□□ -0.76
TPM1-212ENST00000558347 GCATO75600 419 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms