RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SVOPQ8N4V2 548 aa15.63■□□□□ 0.09
SYNE3-203ENST00000554873 TRPV3Q8NET8 790 aa15.63■□□□□ 0.09
SYNE3-203ENST00000554873 MOCOSQ96EN8 888 aa15.63■□□□□ 0.09
SYNE3-203ENST00000554873 NFKBIZQ9BYH8 718 aa15.63■□□□□ 0.09
SYNE3-203ENST00000554873 CXCL16Q9H2A7 254 aa15.63■□□□□ 0.09
SYNE3-203ENST00000554873 WDR6Q9NNW5 1121 aaKnown RBP15.63■□□□□ 0.09
SYNE3-203ENST00000554873 GTF2IRD1Q9UHL9 959 aa15.63■□□□□ 0.09
SYNE3-203ENST00000554873 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
SYNE3-203ENST00000554873 NDUFS2O75306 463 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 C22orf31O95567 290 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 SEPHS1P49903 392 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 BNIP2Q12982 314 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 ADPRMQ3LIE5 342 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 LIPMQ5VYY2 423 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 ADGRG5Q8IZF4 528 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 DCLK2Q8N568 766 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 AFG1LQ8WV93 481 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 SGCDQ92629 289 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 HDAC2Q92769 488 aaKnown RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 GLMNQ92990 594 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 C2orf49Q9BVC5 232 aaPredicted RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 SPATC1LQ9H0A9 340 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 TRIM39Q9HCM9 518 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 INTS10Q9NVR2 710 aaKnown RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 DSEQ9UL01 958 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 USP3Q9Y6I4 520 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 LOC285556D6RIA3 1793 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 SCN1AP35498 2009 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 CCDC78A2IDD5 438 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 STAU1O95793 577 aaKnown RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 F7P08709 466 aaPredicted RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 LRPAP1P30533 357 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 GABARAPL2P60520 117 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 KRR1Q13601 381 aaKnown RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 FASTKQ14296 549 aaKnown RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 SQLEQ14534 574 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 AGKQ53H12 422 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 GRTP1Q5TC63 336 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 TMEM236Q5W0B7 351 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 LAYNQ6UX15 382 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 FAM109AQ8N4B1 249 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 DYNC2LI1Q8TCX1 351 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 KIF12Q96FN5 646 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 PLEKHA5Q9HAU0 1116 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 ATP13A2Q9NQ11 1180 aa15.62■□□□□ 0.09
SYNE3-203ENST00000554873 GMPR2Q9P2T1 348 aaKnown RBP15.62■□□□□ 0.09
SYNE3-203ENST00000554873 TRPC5OSA6NMA1 111 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 PPEF2O14830 753 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 SNRPB2P08579 225 aaKnown RBP15.61■□□□□ 0.09
SYNE3-203ENST00000554873 IL12AP29459 219 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 RFC2P35250 354 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 GP2P55259 537 aaKnown RBP15.61■□□□□ 0.09
SYNE3-203ENST00000554873 BRMS1LQ5PSV4 323 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 THAP5Q7Z6K1 395 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 CLEC14AQ86T13 490 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 C7orf31Q8N865 590 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 IL17RDQ8NFM7 739 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 HMGCLL1Q8TB92 370 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 P2RY11Q96G91 374 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 FCRL3Q96P31 734 aaPredicted RBP15.61■□□□□ 0.09
SYNE3-203ENST00000554873 BTBD2Q9BX70 525 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 ACSS2Q9NR19 701 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 SNX5Q9Y5X3 404 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 PDZK1P1A8MUH7 402 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 SDHDO14521 159 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 TBX1O43435 398 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 HCRTO43612 131 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 MPOP05164 745 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 HTR1AP08908 422 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 HDCP19113 662 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 PSMB4P28070 264 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 OLIG2Q13516 323 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 DPY19L1Q2PZI1 675 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 PITRM1Q5JRX3 1037 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 LCN8Q6JVE9 175 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 LYPD8Q6UX82 237 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 CCBE1Q6UXH8 406 aaPredicted RBP15.61■□□□□ 0.09
SYNE3-203ENST00000554873 PAGE2Q7Z2X7 111 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 SLC22A17Q8WUG5 538 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 ATXN7L3BQ96GX2 97 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 SLC25A23Q9BV35 468 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 DNAI2Q9GZS0 605 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 ANKHQ9HCJ1 492 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 IL37Q9NZH6 218 aa15.61■□□□□ 0.09
SYNE3-203ENST00000554873 A0A096LPK6 155 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 HACD1B0YJ81 288 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 NRP2O60462 931 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 INMTO95050 263 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 APOA4P06727 396 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 GPIP06744 558 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 LCP1P13796 627 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 OR3A3P47888 321 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 GTF2A2P52657 109 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 ERAP2Q6P179 960 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 ZYG11AQ6WRX3 759 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 SLC26A9Q7LBE3 791 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 ZDHHC17Q8IUH5 632 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 CADM2Q8N3J6 435 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 DPF3Q92784 378 aa15.6■□□□□ 0.09
SYNE3-203ENST00000554873 CPNE1Q99829 537 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms