RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 Q6ZNX1 250 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 USP45Q70EL2 814 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 C14orf80Q86SX3 495 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 SPATA2LQ8IUW3 424 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 CD302Q8IX05 232 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 SLC34A3Q8N130 599 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 STKLD1Q8NE28 680 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 WDR36Q8NI36 951 aaKnown RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 MIB2Q96AX9 1013 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 SPATA17Q96L03 361 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 ACBD6Q9BR61 282 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 PYM1Q9BRP8 204 aaKnown RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 AIFM2Q9BRQ8 373 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 BBS2Q9BXC9 721 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 LHX5Q9H2C1 402 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 SIDT1Q9NXL6 827 aaKnown RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 THAP10Q9P2Z0 257 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-223ENST00000553686 DMTF1Q9Y222 760 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 NCKAP1Q9Y2A7 1128 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 TSC2P49815 1807 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 PCNX1Q96RV3 2341 aa6.1□□□□□ -1.43
ATXN3-223ENST00000553686 MTORP42345 2549 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 A1L4Q6 167 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 LACTBL1A8MY62 500 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 NEDD8-MDP1E9PL57 170 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TLR4O00206 839 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 PIRO00625 290 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TIMM44O43615 452 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 OLFM2O95897 454 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 ITGA2BP08514 1039 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CXCL8P10145 99 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 ALPPL2P10696 532 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TYRP14679 529 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CHMLP26374 656 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CXCR5P32302 372 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 MATR3P43243 847 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATXN3-223ENST00000553686 MAGEA11P43364 429 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TAF6P49848 677 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 NEK2P51955 445 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 ENPP2Q13822 863 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 PDIA5Q14554 519 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CLCA4Q14CN2 919 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 ERCC6LQ2NKX8 1250 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 MANEAQ5SRI9 462 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 C9orf57Q5W0N0 161 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 KIAA0895LQ68EN5 471 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 C4orf50Q6ZRC1 276 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 DENND5BQ6ZUT9 1274 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CHD1LQ86WJ1 897 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CFAP52Q8N1V2 620 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 PDPRQ8NCN5 879 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TMIEQ8NEW7 156 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 OR2T3Q8NH03 318 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 MAPK15Q8TD08 544 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 SLITRK1Q96PX8 696 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 SLC26A6Q9BXS9 759 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TRIM9Q9C026 710 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 CCSER1Q9C0I3 900 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 USP29Q9HBJ7 922 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TUFT1Q9NNX1 390 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TMLHEQ9NVH6 421 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 IP6K2Q9UHH9 426 aa6.09□□□□□ -1.43
ATXN3-223ENST00000553686 UTP20O75691 2785 aaKnown RBP6.09□□□□□ -1.43
ATXN3-223ENST00000553686 TDRD15B5MCY1 1934 aaKnown RBP6.09□□□□□ -1.44
ATXN3-223ENST00000553686 PDCD11Q14690 1871 aaKnown RBP6.09□□□□□ -1.44
ATXN3-223ENST00000553686 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 A0A1W2PS29 197 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 ZAR1LA6NP61 321 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 KPNA7A9QM74 516 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 TRIM38O00635 465 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 PPEF2O14830 753 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 DTNBO60941 627 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 OAS1P00973 400 aaKnown RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 DNTTP04053 509 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 CISD3P0C7P0 127 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 CKMT1AP12532 417 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 IFNAR1P17181 557 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 GATA3P23771 443 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 ANXA13P27216 316 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 NPTX2P47972 431 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 HARS2P49590 506 aaKnown RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 COPAP53621 1224 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 PEX3P56589 373 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 NXPH1P58417 271 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 RPS7P62081 194 aaKnown RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 MCL1Q07820 350 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 DYRK1AQ13627 763 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 TTC31Q49AM3 519 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 VSTM1Q6UX27 236 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 HEATR4Q86WZ0 1026 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 BBS7Q8IWZ6 715 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 LNX2Q8N448 690 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 SLC9A6Q92581 669 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms