RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CNOT8Q9UFF9 292 aaKnown RBP8.68□□□□□ -1.02
TMEM116-217ENST00000552801 LIMA1Q9UHB6 759 aaKnown RBP8.68□□□□□ -1.02
TMEM116-217ENST00000552801 IL17BQ9UHF5 180 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 PRDM4Q9UKN5 801 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 SUFUQ9UMX1 484 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 TTLL3Q9Y4R7 772 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 PCDHGC4Q9Y5F7 938 aa8.68□□□□□ -1.02
TMEM116-217ENST00000552801 SCN8AQ9UQD0 1980 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 GOLGA6L9A6NEM1 432 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 PSMD11O00231 422 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 SIAH2O43255 324 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 DUX1O43812 170 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 HEXIM1O94992 359 aaKnown RBP8.67□□□□□ -1.02
TMEM116-217ENST00000552801 FTLP02792 175 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-217ENST00000552801 MYBL1P10243 752 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 ATP1A3P13637 1013 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 SLC2A4P14672 509 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 H2AFXP16104 143 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-217ENST00000552801 AK4P27144 223 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-217ENST00000552801 TRIM23P36406 574 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 ETV5P41161 510 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 ETV3P41162 512 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 CCR10P46092 362 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 HCAR3P49019 387 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 CDH6P55285 790 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 RAB15P59190 212 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 CDK3Q00526 305 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 KLHL30Q0D2K2 578 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 SLC10A7Q0GE19 358 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 CNGA3Q16281 694 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 CA9Q16790 459 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 BOLA3Q53S33 107 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 RALGPS1Q5JS13 557 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 SNAP47Q5SQN1 464 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 CCDC122Q5T0U0 273 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 ZFYVE27Q5T4F4 411 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 BORAQ6PGQ7 559 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 KDELC2Q7Z4H8 507 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 EXD3Q8N9H8 876 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 AP2M1Q96CW1 435 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 DTD2Q96FN9 168 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 OR2M4Q96R27 311 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 NUDCD1Q96RS6 583 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 NUDT22Q9BRQ3 303 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 EFHD1Q9BUP0 239 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 SPATS2LQ9NUQ6 558 aaKnown RBP8.67□□□□□ -1.02
TMEM116-217ENST00000552801 FOXJ2Q9P0K8 574 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 DNPEPQ9ULA0 475 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 MYO6Q9UM54 1294 aa8.67□□□□□ -1.02
TMEM116-217ENST00000552801 ARHGEF17Q96PE2 2063 aaPredicted RBP8.67□□□□□ -1.02
TMEM116-217ENST00000552801 HELZ2Q9BYK8 2649 aaKnown RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 IGHV5-10-1A0A0J9YXX1 117 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 EFCAB7A8K855 629 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ZNF891A8MT65 544 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 C9orf172C9J069 976 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 J3QL48 77 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CAPN5O15484 640 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 FGF1P05230 155 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CTPS1P17812 591 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 MAPK9P45984 424 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ETF1P62495 437 aaKnown RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CYP4F2P78329 520 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 GPLD1P80108 840 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 NFKB2Q00653 900 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 B4GALNT1Q00973 533 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CTBSQ01459 385 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 OGDHQ02218 1023 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 GABPB1Q06547 395 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 SRSF6Q13247 344 aaKnown RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 SEPT6Q14141 434 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 C16orf72Q14CZ0 275 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 TBR1Q16650 682 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 SMTNL2Q2TAL5 461 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 TDRD12Q587J7 1177 aaKnown RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 NKAIN2Q5VXU1 208 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 PLEKHA7Q6IQ23 1121 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ARHGAP36Q6ZRI8 547 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 MARK2Q7KZI7 788 aaKnown RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 SLITRK4Q8IW52 837 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CACNA2D3Q8IZS8 1091 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 NPWQ8N729 165 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 OR4D9Q8NGE8 314 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 FNIP1Q8TF40 1166 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ART4Q93070 314 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 SH3KBP1Q96B97 665 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 COQ10AQ96MF6 247 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CATSPER2Q96P56 530 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 TEFMQ96QE5 360 aaKnown RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 TEX101Q9BY14 249 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 SLC25A18Q9H1K4 315 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ADNPQ9H2P0 1102 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 GPN2Q9H9Y4 310 aaPredicted RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 NT5MQ9NPB1 228 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CWC15Q9P013 229 aaKnown RBP8.66□□□□□ -1.02
TMEM116-217ENST00000552801 ZNHIT2Q9UHR6 403 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 CD84Q9UIB8 345 aa8.66□□□□□ -1.02
TMEM116-217ENST00000552801 SMG1Q96Q15 3661 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms