RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 KRT5P13647 590 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 AARSP49588 968 aaKnown RBP eCLIP3.91□□□□□ -1.78
CNOT2-216ENST00000548939 HSD17B4P51659 736 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 NEDD9Q14511 834 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 ITSN1Q15811 1721 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 EDRF1Q3B7T1 1238 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 DENND1BQ6P3S1 775 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 B3GNT6Q6ZMB0 384 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 CACNA2D3Q8IZS8 1091 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 VPS8Q8N3P4 1428 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 GJC3Q8NFK1 279 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 FAM76AQ8TAV0 307 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 KXD1Q9BQD3 176 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 MOV10L1Q9BXT6 1211 aaKnown RBP3.91□□□□□ -1.78
CNOT2-216ENST00000548939 KLHL1Q9NR64 748 aa3.91□□□□□ -1.78
CNOT2-216ENST00000548939 COL2A1P02458 1487 aaPredicted RBP3.91□□□□□ -1.78
CNOT2-216ENST00000548939 COL18A1P39060 1754 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 HSPB2A8KAH6 182 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 DHX16O60231 1041 aaKnown RBP3.9□□□□□ -1.79
CNOT2-216ENST00000548939 HLA-DOBP13765 273 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 CD58P19256 250 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 CD53P19397 219 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 PITX1P78337 314 aaPredicted RBP3.9□□□□□ -1.79
CNOT2-216ENST00000548939 CUL4BQ13620 913 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 BLMHQ13867 455 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 HSPB2Q16082 182 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 ARHGAP11AQ6P4F7 1023 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 ZC3HAV1LQ96H79 300 aaKnown RBP3.9□□□□□ -1.79
CNOT2-216ENST00000548939 F2RL3Q96RI0 385 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 CSTL1Q9H114 145 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 C17orf75Q9HAS0 396 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 SAYSD1Q9NPB0 183 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 CISD1Q9NZ45 108 aaKnown RBP3.9□□□□□ -1.79
CNOT2-216ENST00000548939 A3GALT2U3KPV4 340 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 CASP8AP2Q9UKL3 1982 aa3.9□□□□□ -1.79
CNOT2-216ENST00000548939 PIK3C2GO75747 1445 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 CPSF1Q10570 1443 aaKnown RBP3.89□□□□□ -1.79
CNOT2-216ENST00000548939 A0A0U1RQF3 1178 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 ARHGAP10A1A4S6 786 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 CBY3A6NI87 242 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 STX16-NPEPL1H3BU86 382 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 STX16O14662 325 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 PCNAP12004 261 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 PTPN2P17706 415 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 ITGAXP20702 1163 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 HMGB2P26583 209 aaKnown RBP3.89□□□□□ -1.79
CNOT2-216ENST00000548939 CHATP28329 748 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 SERPINB3P29508 390 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 ALDH4A1P30038 563 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 BLKP51451 505 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 ITGADQ13349 1161 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 FAM83BQ5T0W9 1011 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 GFRALQ6UXV0 394 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 TBC1D26Q86UD7 250 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.89□□□□□ -1.79
CNOT2-216ENST00000548939 CPXM2Q8N436 756 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 SLC24A4Q8NFF2 622 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 BBS10Q8TAM1 723 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 SNAPC3Q92966 411 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 SDCCAG3Q96C92 435 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 ALG14Q96F25 216 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 CAPNS2Q96L46 248 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 CDK19Q9BWU1 502 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 PCGF6Q9BYE7 350 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 TWSG1Q9GZX9 223 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 PLEKHA5Q9HAU0 1116 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 RALYQ9UKM9 306 aaKnown RBP3.89□□□□□ -1.79
CNOT2-216ENST00000548939 SUFUQ9UMX1 484 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 DERAQ9Y315 318 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 NFE2L3Q9Y4A8 694 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 PDS5AQ29RF7 1337 aaKnown RBP3.89□□□□□ -1.79
CNOT2-216ENST00000548939 POLR3AO14802 1390 aaPredicted RBP3.89□□□□□ -1.79
CNOT2-216ENST00000548939 ANKRD36BQ8N2N9 1353 aa3.89□□□□□ -1.79
CNOT2-216ENST00000548939 VIRMAQ69YN4 1812 aaKnown RBP3.88□□□□□ -1.79
CNOT2-216ENST00000548939 SPATA31E1Q6ZUB1 1445 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 C17orf113A0A1B0GUU1 675 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 IPO5O00410 1097 aaKnown RBP3.88□□□□□ -1.79
CNOT2-216ENST00000548939 CEP104O60308 925 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 TMPOP42166 694 aaKnown RBP3.88□□□□□ -1.79
CNOT2-216ENST00000548939 NR1H2P55055 460 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 YWHAZP63104 245 aaKnown RBP3.88□□□□□ -1.79
CNOT2-216ENST00000548939 TMF1P82094 1093 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 CCDC38Q502W7 563 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 HSP90AB2PQ58FF8 381 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 KCNT1Q5JUK3 1230 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 TOGARAM2Q6ZUX3 1019 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 MOB3CQ70IA8 216 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 TMEM219Q86XT9 240 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 CNBD1Q8NA66 436 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 MAGEC3Q8TD91 643 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 THAP4Q8WY91 577 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 CNOT9Q92600 299 aaKnown RBP3.88□□□□□ -1.79
CNOT2-216ENST00000548939 RND1Q92730 232 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 SH3KBP1Q96B97 665 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 ANKRD9Q96BM1 317 aaPredicted RBP3.88□□□□□ -1.79
CNOT2-216ENST00000548939 CDCA5Q96FF9 252 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 LTV1Q96GA3 475 aaPredicted RBP3.88□□□□□ -1.79
CNOT2-216ENST00000548939 ZNF583Q96ND8 569 aa3.88□□□□□ -1.79
CNOT2-216ENST00000548939 SLC32A1Q9H598 525 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms