RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PTPN9P43378 593 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 SP3Q02447 781 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 UXS1Q8NBZ7 420 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 OR4L1Q8NH43 312 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 RNF208Q9H0X6 261 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 OGDHLQ9ULD0 1010 aa19.32■□□□□ 0.68
SUDS3-204ENST00000543473 CNOT6Q9ULM6 557 aaKnown RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 COL1A1P02452 1464 aaPredicted RBP19.32■□□□□ 0.68
SUDS3-204ENST00000543473 GNA12Q03113 381 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 CDK18Q07002 472 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 PYROXD2Q8N2H3 581 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 CLEC4DQ8WXI8 215 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 CITED4Q96RK1 184 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 YME1L1Q96TA2 773 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 GBA3Q9H227 469 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 KLHL28Q9NXS3 571 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 WDR37Q9Y2I8 494 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 NDUFS2O75306 463 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 EGFRP00533 1210 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 PABPC4LP0CB38 370 aaKnown RBP19.31■□□□□ 0.68
SUDS3-204ENST00000543473 GNAZP19086 355 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 TYMPP19971 482 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 NMBRP28336 390 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 GRIA1P42261 906 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 GSTM5P46439 218 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 DEFB115Q30KQ5 88 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 SH3PXD2AQ5TCZ1 1133 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 PPP4R4Q6NUP7 873 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 ZC3H3Q8IXZ2 948 aaKnown RBP19.31■□□□□ 0.68
SUDS3-204ENST00000543473 Q96MT0 163 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 PGLYRP2Q96PD5 576 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 EMILIN2Q9BXX0 1053 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 DTLQ9NZJ0 730 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 KANSL3Q9P2N6 904 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 PCDHB5Q9Y5E4 795 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 TSPAN9O75954 239 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 VNN1O95497 513 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 LRG1P02750 347 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 YWHAQP27348 245 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 CPSF6Q16630 551 aaKnown RBP eCLIP19.31■□□□□ 0.68
SUDS3-204ENST00000543473 FAM110CQ1W6H9 321 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 CDC73Q6P1J9 531 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 DLK2Q6UY11 383 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 UNC5BQ8IZJ1 945 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 DQX1Q8TE96 717 aaKnown RBP19.31■□□□□ 0.68
SUDS3-204ENST00000543473 HEXDCQ8WVB3 486 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 FAM159BA6NKW6 160 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 ARF4P18085 180 aaPredicted RBP19.31■□□□□ 0.68
SUDS3-204ENST00000543473 ALDH4A1P30038 563 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 RHBDF2Q6PJF5 856 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 CCDC185Q8N715 623 aa19.31■□□□□ 0.68
SUDS3-204ENST00000543473 PHF10Q8WUB8 498 aaKnown RBP19.31■□□□□ 0.68
SUDS3-204ENST00000543473 ATRNL1Q5VV63 1379 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 PDLIM1O00151 329 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 PSMD11O00231 422 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ZBTB14O43829 449 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 OR56A5P0C7T3 313 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ZNF460Q14592 562 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 YAF2Q8IY57 180 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ZNF516Q92618 1163 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 TMEM159Q96B96 161 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 LINGO1Q96FE5 620 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 CRISPLD1Q9H336 500 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 SAMD4AQ9UPU9 718 aaKnown RBP19.3■□□□□ 0.68
SUDS3-204ENST00000543473 A6NHS1 94 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 H3BMM5 538 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 J3QRK9 145 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 TULP3O75386 442 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 TAS2R39P59534 338 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 FBXL8Q96CD0 374 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ITCHQ96J02 903 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 EIF2B3Q9NR50 452 aaKnown RBP19.3■□□□□ 0.68
SUDS3-204ENST00000543473 TOR4AQ9NXH8 423 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 MRPL39Q9NYK5 338 aaKnown RBP19.3■□□□□ 0.68
SUDS3-204ENST00000543473 AHSPQ9NZD4 102 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 AQP12BA6NM10 295 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 SKIV2LQ15477 1246 aaKnown RBP19.3■□□□□ 0.68
SUDS3-204ENST00000543473 AP5B1Q2VPB7 878 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 MZT2AQ6P582 158 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 PLET1Q6UQ28 207 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 AQP12AQ8IXF9 295 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 OXSMQ9NWU1 459 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 NOGQ13253 232 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 KCNJ11Q14654 390 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ACAP2Q15057 778 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 CA9Q16790 459 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 FAM182AQ5T1J6 154 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 RAB43Q86YS6 212 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ASZ1Q8WWH4 475 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 GPR20Q99678 358 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 MIPEPQ99797 713 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ZYG11BQ9C0D3 744 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 HIPK3Q9H422 1215 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 MARCH2Q9P0N8 246 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 SSR3Q9UNL2 185 aa19.3■□□□□ 0.68
SUDS3-204ENST00000543473 ELOVL7A1L3X0 281 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 STK25O00506 426 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 ITGA2P17301 1181 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 TCEAL1Q15170 157 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 TYSND1Q2T9J0 566 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms