RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZGRF1Q86YA3 2104 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 ABCA4P78363 2273 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 FOXO6A8MYZ6 492 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 BUB1O43683 1085 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 RAMP2O60895 175 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 TMCC1O94876 653 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 CLDN14O95500 239 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 TEAD1P28347 426 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 SERPINA4P29622 427 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 HNRNPH3P31942 346 aaKnown RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 ARL4DP49703 201 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 SH3BP2P78314 561 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 PITX1P78337 314 aaPredicted RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 CDK3Q00526 305 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 PTK2Q05397 1052 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 CETN1Q12798 172 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 DSG2Q14126 1118 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 CACHD1Q5VU97 1274 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 TCERG1LQ5VWI1 586 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 TMEM207Q6UWW9 146 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 LIPIQ6XZB0 460 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 SIDT2Q8NBJ9 832 aaKnown RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 TGM7Q96PF1 710 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 PPARGC1AQ9UBK2 798 aaKnown RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 NOVA2Q9UNW9 492 aaKnown RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 COQ4Q9Y3A0 265 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.37□□□□□ -0.91
YBX3-211ENST00000541351 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
YBX3-211ENST00000541351 TRBV23OR9-2A0A075B6M9 112 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 GOLGA6CA6NDK9 693 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 GOLGA6BA6NDN3 693 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 CREB3O43889 395 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 UBXN7O94888 489 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 CD160O95971 181 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 PYGLP06737 847 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 CD63P08962 238 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 GOLGA6DP0CG33 693 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 NELFEP18615 380 aaKnown RBP9.36□□□□□ -0.91
YBX3-211ENST00000541351 HADHAP40939 763 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 CXCR3P49682 368 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 CEBPZQ03701 1054 aaKnown RBP9.36□□□□□ -0.91
YBX3-211ENST00000541351 STK4Q13043 487 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 ATP1A4Q13733 1029 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 LAMB3Q13751 1172 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 ZNF169Q14929 603 aaPredicted RBP9.36□□□□□ -0.91
YBX3-211ENST00000541351 SLC39A14Q15043 492 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 TLR1Q15399 786 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 ANO6Q4KMQ2 910 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 PWWP2BQ6NUJ5 590 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 GFRALQ6UXV0 394 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 TMEM126BQ8IUX1 230 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 ZNF683Q8IZ20 524 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 ENDOVQ8N8Q3 282 aaKnown RBP9.36□□□□□ -0.91
YBX3-211ENST00000541351 DNAJB14Q8TBM8 379 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 NUDT8Q8WV74 236 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 TEKT4Q8WW24 435 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 UBXN4Q92575 508 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 INPP5DQ92835 1189 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 LRFN5Q96NI6 719 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 NT5C1BQ96P26 610 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 BLZF1Q9H2G9 400 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 GSX1Q9H4S2 264 aaPredicted RBP9.36□□□□□ -0.91
YBX3-211ENST00000541351 EPS8L2Q9H6S3 715 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 ATP13A3Q9H7F0 1226 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 GOLGA6AQ9NYA3 693 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 NBEAL1Q6ZS30 2694 aa9.36□□□□□ -0.91
YBX3-211ENST00000541351 FN1P02751 2386 aaKnown RBP9.35□□□□□ -0.91
YBX3-211ENST00000541351 A0A0U1RQS6 177 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 C9J4A7 227 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 KDELR3O43731 214 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 DAB1O75553 588 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 F3P13726 295 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 CA7P43166 264 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 GFERP55789 205 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
YBX3-211ENST00000541351 DEUP1Q05D60 604 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 INAQ16352 499 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 LONRF1Q17RB8 773 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 DCAF10Q5QP82 559 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 AFMIDQ63HM1 303 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 RAET1GQ6H3X3 334 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 IYDQ6PHW0 289 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 MEX3BQ6ZN04 569 aaKnown RBP9.35□□□□□ -0.91
YBX3-211ENST00000541351 C11orf57Q6ZUT1 292 aaPredicted RBP9.35□□□□□ -0.91
YBX3-211ENST00000541351 DPPA4Q7L190 304 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 KMT5CQ86Y97 462 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 TRIM48Q8IWZ4 208 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 UBR7Q8N806 425 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 KLHL6Q8WZ60 621 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 CPT1BQ92523 772 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 RNF31Q96EP0 1072 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 PGAP3Q96FM1 320 aaPredicted RBP9.35□□□□□ -0.91
YBX3-211ENST00000541351 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
YBX3-211ENST00000541351 RUFY1Q96T51 708 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms