RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ERAP2Q6P179 960 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 KYAT3Q6YP21 454 aaKnown RBP11.39□□□□□ -0.59
TMEM258-205ENST00000540434 PID1Q7Z2X4 250 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 PTAR1Q7Z6K3 402 aaPredicted RBP11.39□□□□□ -0.59
TMEM258-205ENST00000540434 IQCHQ86VS3 1027 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 SLC13A5Q86YT5 568 aaPredicted RBP11.39□□□□□ -0.59
TMEM258-205ENST00000540434 UBL4BQ8N7F7 174 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 SLC35B2Q8TB61 432 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 CCDC110Q8TBZ0 833 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 MRGPRX2Q96LB1 330 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 DPH1Q9BZG8 443 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 ASCL3Q9NQ33 180 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 OR1A2Q9Y585 309 aa11.39□□□□□ -0.59
TMEM258-205ENST00000540434 SPTY2D1-AS1A0A0U1RR47 76 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 HACD1B0YJ81 288 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 FPGTO14772 594 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 FANCGO15287 622 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 KCNN4O15554 427 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 TJP3O95049 919 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 SOD1P00441 154 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 PCCBP05166 539 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 CELA2BP08218 269 aaPredicted RBP11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ELFN1P0C7U0 828 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ETS1P14921 441 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 CES1P23141 567 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ERVPABLB-1P60509 514 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 E2F1Q01094 437 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 PDE1CQ14123 709 aaPredicted RBP11.38□□□□□ -0.59
TMEM258-205ENST00000540434 LRRC14Q15048 493 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ACOX1Q15067 660 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ANKRD20A2Q5SQ80 823 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 CCDC181Q5TID7 509 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ANKRD20A1Q5TYW2 823 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ANKRD20A3Q5VUR7 823 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 DARS2Q6PI48 645 aaKnown RBP11.38□□□□□ -0.59
TMEM258-205ENST00000540434 BZW1Q7L1Q6 419 aaKnown RBP11.38□□□□□ -0.59
TMEM258-205ENST00000540434 RBFAQ8N0V3 343 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 TXLNBQ8N3L3 684 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 GLIS1Q8NBF1 620 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 C1orf54Q8WWF1 131 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 SCAMP4Q969E2 229 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 FCRL5Q96RD9 977 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ABCG8Q9H221 673 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 ERVMER34-1Q9H9K5 563 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 STARD5Q9NSY2 213 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 WDR70Q9NW82 654 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 SMARCAL1Q9NZC9 954 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 TPX2Q9ULW0 747 aaKnown RBP11.38□□□□□ -0.59
TMEM258-205ENST00000540434 LRP4O75096 1905 aa11.38□□□□□ -0.59
TMEM258-205ENST00000540434 TLN1Q9Y490 2541 aaKnown RBP11.38□□□□□ -0.59
TMEM258-205ENST00000540434 LOC285095A0A1B0GVY8 99 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 BLACEA4D250 179 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 CFAP69A5D8W1 941 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 TMEM202A6NGA9 273 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 A6NNZ2 444 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 EFSO43281 561 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 USP12O75317 370 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 GCATO75600 419 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 NEBLO76041 1014 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 METTL18O95568 372 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 AGTP01019 485 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 PSMB4P28070 264 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 CA5AP35218 305 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 LSSP48449 732 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 STC1P52823 247 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 WNT3AP56704 352 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 CDK18Q07002 472 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 MSLNQ13421 630 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SNX1Q13596 522 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SPARCL1Q14515 664 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 TCEA2Q15560 299 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 OASLQ15646 514 aaKnown RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 IGFBP7Q16270 282 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SIRPB2Q5JXA9 342 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 CCDC81Q6ZN84 652 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 LYSMD3Q7Z3D4 306 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 LSMEM2Q8N112 164 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SLC35F6Q8N357 371 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 C17orf53Q8N3J3 647 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 TAB3Q8N5C8 712 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SLC25A41Q8N5S1 370 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 PAF1Q8N7H5 531 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 FAM71DQ8N9W8 422 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 DENND6BQ8NEG7 585 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 EXTL1Q92935 676 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 TSACCQ96A04 125 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SKA1Q96BD8 255 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 DTD2Q96FN9 168 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 MS4A14Q96JA4 679 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 PSMG3-AS1Q96PY0 264 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 TMEM121Q9BTD3 319 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 APOOQ9BUR5 198 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 MRPL40Q9NQ50 206 aaKnown RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 KLHL8Q9P2G9 620 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SHOC2Q9UQ13 582 aa11.37□□□□□ -0.59
TMEM258-205ENST00000540434 PCYT1BQ9Y5K3 369 aaPredicted RBP11.37□□□□□ -0.59
TMEM258-205ENST00000540434 SCN8AQ9UQD0 1980 aa11.36□□□□□ -0.59
TMEM258-205ENST00000540434 A0A1W2PNU3 283 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms