RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 COL27A1Q8IZC6 1860 aaPredicted RBP30.12■■■□□ 2.41
SSSCA1-207ENST00000533115 CELSR3Q9NYQ7 3312 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 CASC3O15234 703 aaKnown RBP30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 INPP4BO15327 924 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 USP12O75317 370 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 NDST3O95803 873 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 PIRTP0C851 137 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 NFKB1P19838 968 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 RWDD2BP57060 319 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 XRCC4Q13426 336 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 CCDC181Q5TID7 509 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 CCDC70Q6NSX1 233 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 SFTPA2Q8IWL1 248 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 ZNF567Q8N184 647 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 TXLNBQ8N3L3 684 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 HERPUD2Q9BSE4 406 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 OSBPL8Q9BZF1 889 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 SPATS2LQ9NUQ6 558 aaKnown RBP30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 FAM153AQ9UHL3 310 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 SHOC2Q9UQ13 582 aa30.11■■■□□ 2.41
SSSCA1-207ENST00000533115 CHD6Q8TD26 2715 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 PTPN7P35236 360 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 ADCY8P40145 1251 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 CTBSQ01459 385 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 KIF5AQ12840 1032 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 NOMO1Q15155 1222 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 C14orf28Q4W4Y0 310 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 PID1Q7Z2X4 250 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 GRAMD1AQ96CP6 724 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 DESI2Q9BSY9 194 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 TAAR2Q9P1P5 351 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 CNOT6Q9ULM6 557 aaKnown RBP30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 ZNF711Q9Y462 761 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 GPSM3Q9Y4H4 160 aa30.1■■■□□ 2.41
SSSCA1-207ENST00000533115 NTN3O00634 580 aaPredicted RBP30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 URB1O60287 2271 aaKnown RBP30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 BRINP1O60477 761 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 GLB1P16278 677 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 AK4P27144 223 aaPredicted RBP30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 SPIDRQ14159 915 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 HLTFQ14527 1009 aaKnown RBP eCLIP30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 CERCAMQ5T4B2 595 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 KDELC1Q6UW63 502 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 TMC3Q7Z5M5 1100 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 ALG3Q92685 438 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 OR2M4Q96R27 311 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 FCRL5Q96RD9 977 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 CDH19Q9H159 772 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 SYNDIG1Q9H7V2 258 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 ST14Q9Y5Y6 855 aa30.09■■■□□ 2.41
SSSCA1-207ENST00000533115 MACROD2A1Z1Q3 448 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 FADS2P1A8MWK0 482 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 H7C0C1 242 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 ASMTLO95671 621 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 FGF1P05230 155 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 CETN2P41208 172 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 ATP5OP48047 213 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 PYCR3Q53H96 274 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 SLC30A9Q6PML9 568 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 MARK2Q7KZI7 788 aaKnown RBP30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 ZDHHC1Q8WTX9 485 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 SRPK1Q96SB4 655 aaKnown RBP30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 GPR63Q9BZJ6 419 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 TRIM10Q9UDY6 481 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 APPL1Q9UKG1 709 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 TRHDEQ9UKU6 1024 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 AMFRQ9UKV5 643 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 ENTPD2Q9Y5L3 495 aa30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 ARHGEF17Q96PE2 2063 aaPredicted RBP30.08■■■□□ 2.41
SSSCA1-207ENST00000533115 LOC285095A0A1B0GVY8 99 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 GOLGA6L6A8MZA4 724 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 MPOP05164 745 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 PNLIPP16233 465 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 RBL1P28749 1068 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 WNT3AP56704 352 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 CCL7P80098 99 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 OTUD4Q01804 1114 aaKnown RBP30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 PEX6Q13608 980 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 GALNT13Q8IUC8 556 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 ACTL9Q8TC94 416 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 C10orf88Q9H8K7 445 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 RAD18Q9NS91 495 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 VPS18Q9P253 973 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 LRIT1Q9P2V4 623 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 PLEKHM1Q9Y4G2 1056 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 OAS3Q9Y6K5 1087 aaKnown RBP30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 RNF215Q9Y6U7 377 aa30.07■■■□□ 2.4
SSSCA1-207ENST00000533115 A0A0U1RQJ8 604 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 F5H423 210 aaPredicted RBP30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 TLX3O43711 291 aaPredicted RBP30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 NUDT21O43809 227 aaKnown RBP30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 SLC4A1P02730 911 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 ATP1A1P05023 1023 aaKnown RBP30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 RPLP0P05388 317 aaKnown RBP30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 PYGMP11217 842 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 LSSP48449 732 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 GABREP78334 506 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 PEX26Q7Z412 305 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 SYCE1Q8N0S2 351 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 GPR26Q8NDV2 337 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms