RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 PSMB4P28070 264 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 RPIAP49247 311 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 GEMP55040 296 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 KLF1Q13351 362 aaPredicted RBP14.38□□□□□ -0.11
PUF60-220ENST00000532884 MPP3Q13368 585 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 ILKQ13418 452 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 OLIG2Q13516 323 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 SLC1A5Q15758 541 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 SMAD1Q15797 465 aaKnown RBP14.38□□□□□ -0.11
PUF60-220ENST00000532884 C6orf132Q5T0Z8 1188 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 HES3Q5TGS1 186 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 CCNI2Q6ZMN8 369 aaPredicted RBP14.38□□□□□ -0.11
PUF60-220ENST00000532884 EFL1Q7Z2Z2 1120 aaKnown RBP14.38□□□□□ -0.11
PUF60-220ENST00000532884 TMC3Q7Z5M5 1100 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 SLC35F3Q8IY50 421 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 GPR26Q8NDV2 337 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 BLOC1S5Q8TDH9 187 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 WDR24Q96S15 920 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
PUF60-220ENST00000532884 DPEP2Q9H4A9 486 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 ARFGAP3Q9NP61 516 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 U3KQA8 63 aa14.38□□□□□ -0.11
PUF60-220ENST00000532884 COL5A1P20908 1838 aaPredicted RBP14.38□□□□□ -0.11
PUF60-220ENST00000532884 RGSL1A5PLK6 1076 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 FADS2P1A8MWK0 482 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 B4DGG1 531 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 EPOP01588 193 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 PYGLP06737 847 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 CDK4P11802 303 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 TEAD1P28347 426 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 E2F1Q01094 437 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 SNX1Q13596 522 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 SPARCL1Q14515 664 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 ZNF648Q5T619 568 aaPredicted RBP14.37□□□□□ -0.11
PUF60-220ENST00000532884 HENMT1Q5T8I9 393 aaKnown RBP14.37□□□□□ -0.11
PUF60-220ENST00000532884 LVRNQ6Q4G3 990 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 UNQ6494/PRO21346Q6UXR6 183 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 ZNF662Q6ZS27 426 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 ARHGEF18Q6ZSZ5 1173 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 NLRP8Q86W28 1048 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 SFTPA2Q8IWL1 248 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 KYQ8NBH2 561 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 MAPK15Q8TD08 544 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 C1orf54Q8WWF1 131 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 ANP32BQ92688 251 aaKnown RBP14.37□□□□□ -0.11
PUF60-220ENST00000532884 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
PUF60-220ENST00000532884 GORASP1Q9BQQ3 440 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 BOCQ9BWV1 1114 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 NCKIPSDQ9NZQ3 722 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 ZNHIT2Q9UHR6 403 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 CNOT6Q9ULM6 557 aaKnown RBP14.37□□□□□ -0.11
PUF60-220ENST00000532884 PADI4Q9UM07 663 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 SLC17A4Q9Y2C5 497 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 AAR2Q9Y312 384 aaKnown RBP14.37□□□□□ -0.11
PUF60-220ENST00000532884 PRKAB1Q9Y478 270 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 PLEKHM1Q9Y4G2 1056 aa14.37□□□□□ -0.11
PUF60-220ENST00000532884 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
PUF60-220ENST00000532884 FAM221BA6H8Z2 402 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 OPA1O60313 960 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 USP12O75317 370 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 BPIP17213 487 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 HLA-DPA1P20036 260 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 AK4P27144 223 aaPredicted RBP14.36□□□□□ -0.11
PUF60-220ENST00000532884 ADCY8P40145 1251 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 INSM1Q01101 510 aaPredicted RBP14.36□□□□□ -0.11
PUF60-220ENST00000532884 ILF3Q12906 894 aaKnown RBP eCLIP14.36□□□□□ -0.11
PUF60-220ENST00000532884 TARDBPQ13148 414 aaKnown RBP eCLIP14.36□□□□□ -0.11
PUF60-220ENST00000532884 SLC30A9Q6PML9 568 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 GLT6D1Q7Z4J2 308 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 TMPRSS12Q86WS5 348 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 SLC13A5Q86YT5 568 aaPredicted RBP14.36□□□□□ -0.11
PUF60-220ENST00000532884 SDR16C5Q8N3Y7 309 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 TRIM58Q8NG06 486 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 GATA6Q92908 595 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 SYNDIG1Q9H7V2 258 aa14.36□□□□□ -0.11
PUF60-220ENST00000532884 OAS3Q9Y6K5 1087 aaKnown RBP14.36□□□□□ -0.11
PUF60-220ENST00000532884 C5orf60A6NFR6 353 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 SLC25A14O95258 325 aaPredicted RBP14.35□□□□□ -0.11
PUF60-220ENST00000532884 METTL18O95568 372 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 FGF1P05230 155 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 IVLP07476 585 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 CXCR5P32302 372 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 GDF10P55107 478 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 CTBSQ01459 385 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 PTPRCAPQ14761 206 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 ZNF569Q5MCW4 686 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 PERM1Q5SV97 790 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 GALNT13Q8IUC8 556 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 RAVER1Q8IY67 606 aaKnown RBP14.35□□□□□ -0.11
PUF60-220ENST00000532884 ARL10Q8N8L6 244 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 SLC35B2Q8TB61 432 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 COX14Q96I36 57 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 GSDMCQ9BYG8 508 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 TRABDQ9H4I3 376 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 RAD18Q9NS91 495 aa14.35□□□□□ -0.11
PUF60-220ENST00000532884 SPATS2LQ9NUQ6 558 aaKnown RBP14.35□□□□□ -0.11
PUF60-220ENST00000532884 TRNAU1APQ9NX07 287 aaKnown RBP14.35□□□□□ -0.11
PUF60-220ENST00000532884 CLCA2Q9UQC9 943 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms