RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 TRNAU1APQ9NX07 287 aaKnown RBP18.3■□□□□ 0.52
HOXD11-202ENST00000498438 TRIM10Q9UDY6 481 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 RABGEF1Q9UJ41 708 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 SHOC2Q9UQ13 582 aa18.3■□□□□ 0.52
HOXD11-202ENST00000498438 NOBOXO60393 691 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 NDST3O95803 873 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 PTPN7P35236 360 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 RWDD2BP57060 319 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 OGFOD3Q6PK18 319 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 RBM44Q6ZP01 1051 aaKnown RBP18.29■□□□□ 0.52
HOXD11-202ENST00000498438 ZNF567Q8N184 647 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 EID2BQ96D98 161 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 SCARF2Q96GP6 870 aaPredicted RBP18.29■□□□□ 0.52
HOXD11-202ENST00000498438 COX14Q96I36 57 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 VAT1Q99536 393 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 GSDMCQ9BYG8 508 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 OSBPL8Q9BZF1 889 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 DPEP2Q9H4A9 486 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 FAM83DQ9H4H8 585 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 SYNDIG1Q9H7V2 258 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 MAGEE1Q9HCI5 957 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 FAM153AQ9UHL3 310 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 ZNF711Q9Y462 761 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 ZFC3H1O60293 1989 aaKnown RBP18.29■□□□□ 0.52
HOXD11-202ENST00000498438 SCN8AQ9UQD0 1980 aa18.29■□□□□ 0.52
HOXD11-202ENST00000498438 RGSL1A5PLK6 1076 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 FADS2P1A8MWK0 482 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 H7C0C1 242 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 BRINP1O60477 761 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 USP12O75317 370 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 TCEA3O75764 348 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 AK4P27144 223 aaPredicted RBP18.28■□□□□ 0.52
HOXD11-202ENST00000498438 ADCY8P40145 1251 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 ATP5OP48047 213 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 CTBSQ01459 385 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 OTUD4Q01804 1114 aaKnown RBP18.28■□□□□ 0.52
HOXD11-202ENST00000498438 KIF5AQ12840 1032 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 XRCC4Q13426 336 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 ISXQ2M1V0 245 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 C14orf28Q4W4Y0 310 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 CERCAMQ5T4B2 595 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 AADACL2Q6P093 401 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 SLC30A9Q6PML9 568 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 KDELC1Q6UW63 502 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 MARK2Q7KZI7 788 aaKnown RBP18.28■□□□□ 0.52
HOXD11-202ENST00000498438 TXLNBQ8N3L3 684 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 OR6C4Q8NGE1 309 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 WDR48Q8TAF3 677 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 ACTL9Q8TC94 416 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 OR2M4Q96R27 311 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 CDH19Q9H159 772 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 C10orf88Q9H8K7 445 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 SPATS2LQ9NUQ6 558 aaKnown RBP18.28■□□□□ 0.52
HOXD11-202ENST00000498438 TAAR2Q9P1P5 351 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 CNOT6Q9ULM6 557 aaKnown RBP18.28■□□□□ 0.52
HOXD11-202ENST00000498438 EFR3BQ9Y2G0 817 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 ST14Q9Y5Y6 855 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 OAS3Q9Y6K5 1087 aaKnown RBP18.28■□□□□ 0.52
HOXD11-202ENST00000498438 ZFYVE26Q68DK2 2539 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 KIF26BQ2KJY2 2108 aa18.28■□□□□ 0.52
HOXD11-202ENST00000498438 FAM208BQ5VWN6 2430 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 ASMTLO95671 621 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 RBL1P28749 1068 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 PDX1P52945 283 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 WNT3AP56704 352 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 SPIDRQ14159 915 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 HLTFQ14527 1009 aaKnown RBP eCLIP18.27■□□□□ 0.52
HOXD11-202ENST00000498438 ALS2CLQ60I27 953 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 CCDC70Q6NSX1 233 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 PID1Q7Z2X4 250 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 PEX26Q7Z412 305 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 OXNAD1Q96HP4 312 aaPredicted RBP18.27■□□□□ 0.52
HOXD11-202ENST00000498438 FCRL5Q96RD9 977 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 FAM118BQ9BPY3 351 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 GPR63Q9BZJ6 419 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 AMFRQ9UKV5 643 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 PLEKHM1Q9Y4G2 1056 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 GPSM3Q9Y4H4 160 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 SPO11Q9Y5K1 396 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 UNC13CQ8NB66 2214 aa18.27■□□□□ 0.52
HOXD11-202ENST00000498438 NTN3O00634 580 aaPredicted RBP18.26■□□□□ 0.51
HOXD11-202ENST00000498438 FTCDO95954 541 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 ATP1A1P05023 1023 aaKnown RBP18.26■□□□□ 0.51
HOXD11-202ENST00000498438 MPOP05164 745 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 RPLP0P05388 317 aaKnown RBP18.26■□□□□ 0.51
HOXD11-202ENST00000498438 PYGMP11217 842 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 CETN2P41208 172 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 MAZP56270 477 aaKnown RBP18.26■□□□□ 0.51
HOXD11-202ENST00000498438 GABREP78334 506 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 PYCR3Q53H96 274 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 TMC3Q7Z5M5 1100 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 GALNT13Q8IUC8 556 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 SYCE1Q8N0S2 351 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 GPR26Q8NDV2 337 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 ZDHHC1Q8WTX9 485 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 ATXN7L3BQ96GX2 97 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 MRGPRX2Q96LB1 330 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 SPATA16Q9BXB7 569 aa18.26■□□□□ 0.51
HOXD11-202ENST00000498438 VPS18Q9P253 973 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms