RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 SCN5AQ14524 2016 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 IGLV5-37A0A075B6J1 123 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 A0A0U1RQJ8 604 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 ANKRD18BA2A2Z9 1011 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 LIPT2A6NK58 231 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 F5H0A9 414 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 HS6ST1O60243 411 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 USO1O60763 962 aaKnown RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 JRKO75564 520 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 DDNO94850 711 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 DAOP14920 347 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 CDH2P19022 906 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 MCM3P25205 808 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 AMPHP49418 695 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 COMPP49747 757 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 CLCNKAP51800 687 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 TUBA1BP68363 451 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 ZBED6P86452 979 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 PDE1BQ01064 536 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 ACSM2AQ08AH3 577 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 CDC16Q13042 620 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 COASYQ13057 564 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 MAD2L1Q13257 205 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 TNFAIP1Q13829 316 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 KRT24Q2M2I5 525 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 RILPL1Q5EBL4 403 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 CXorf66Q5JRM2 361 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 KCNT1Q5JUK3 1230 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 DCST1Q5T197 706 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 GPATCH4Q5T3I0 446 aaKnown RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 ACSM2BQ68CK6 577 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 C1orf122Q6ZSJ8 110 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 MTSS1LQ765P7 747 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 NR2C2APQ86WQ0 139 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 SFR1Q86XK3 245 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 PGBD5Q8N414 524 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 TTC39CQ8N584 583 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 MAGEC3Q8TD91 643 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 DNAAF4Q8WXU2 420 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 NR4A3Q92570 626 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 USP6NLQ92738 828 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 C1orf74Q96LT6 269 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 MTERF1Q99551 399 aaKnown RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 CMKLR1Q99788 373 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 CHCHD6Q9BRQ6 235 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 C1QTNF5Q9BXJ0 243 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 MAF1Q9H063 256 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 MUC13Q9H3R2 512 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 SCPEP1Q9HB40 452 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 NOX4Q9NPH5 578 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 PLSCR4Q9NRQ2 329 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 ACSS1Q9NUB1 689 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 OR14J1Q9UGF5 321 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 FBXO2Q9UK22 296 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 ZNF215Q9UL58 517 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-205ENST00000497722 PCDHAC2Q9Y5I4 1007 aa3.27□□□□□ -1.89
PSPC1-205ENST00000497722 SAA2-SAA4A0A096LPE2 208 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 IGLV5-52A0A0A0MRZ9 124 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 WNT9BO14905 357 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SPINT2O43291 252 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 PLRG1O43660 514 aaKnown RBP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 NDUFS7O75251 213 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 TSPAN9O75954 239 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 IGKV3-20P01619 116 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 RB1P06400 928 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 IGHV4-30-4P0DP06 118 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SRCP12931 536 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 LAMP2P13473 410 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 CAPN3P20807 821 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 MAOAP21397 527 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 TMPOP42166 694 aaKnown RBP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 MATR3P43243 847 aaKnown RBP eCLIP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 CLCN3P51790 818 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 CDH8P55286 799 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SNX16P57768 344 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 ECT2LQ008S8 904 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 GRSF1Q12849 480 aaKnown RBP eCLIP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 GRIK2Q13002 908 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 IKQ13123 557 aaPredicted RBP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SNTA1Q13424 505 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 EFNB3Q15768 340 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 PNLIPRP3Q17RR3 467 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 PAPPA-AS1Q5QFB9 102 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 HYIQ5T013 277 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SNX30Q5VWJ9 437 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 HIST2H2BCQ6DN03 193 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 HIST2H2BDQ6DRA6 164 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SPSB3Q6PJ21 355 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 GSG1LQ6UXU4 331 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 GLDNQ6ZMI3 551 aaPredicted RBP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 DPPA4Q7L190 304 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 CCDC190Q86UF4 302 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 TAGAPQ8N103 731 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 C17orf53Q8N3J3 647 aaPredicted RBP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 OR8K5Q8NH50 307 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 PPP4R1Q8TF05 950 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 TANKQ92844 425 aa3.26□□□□□ -1.89
PSPC1-205ENST00000497722 SAT2Q96F10 170 aaPredicted RBP3.26□□□□□ -1.89
PSPC1-205ENST00000497722 PERPQ96FX8 193 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms