RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 FGF4P08620 206 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 ITGAXP20702 1163 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 KCNC1P48547 511 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 SLC25A3Q00325 362 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 CUL3Q13618 768 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 SETMARQ53H47 684 aaPredicted RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 ZRANB3Q5FWF4 1079 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PPM1LQ5SGD2 360 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PSAPL1Q6NUJ1 521 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PAQR3Q6TCH7 311 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 C16orf89Q6UX73 402 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PIANPQ8IYJ0 282 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PTGR2Q8N8N7 351 aaPredicted RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 LEMD2Q8NC56 503 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 GRIN3AQ8TCU5 1115 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 SH3RF2Q8TEC5 729 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 LENG8Q96PV6 779 aaPredicted RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 TUBGCP5Q96RT8 1024 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 TTC1Q99614 292 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 SHCBP1LQ9BZQ2 653 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 ZBTB26Q9HCK0 441 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 STX18Q9P2W9 335 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 TRMT6Q9UJA5 497 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PRPF19Q9UMS4 504 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 TRAF6Q9Y4K3 522 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 H3BMM5 538 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 STX16-NPEPL1H3BU86 382 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 STX16O14662 325 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 SCAMP3O14828 347 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 MT-CO1P00395 513 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PRSS56P0CW18 603 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 HSPA1AP0DMV8 641 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 HSPA1BP0DMV9 641 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 MTHFD2P13995 350 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 RPS3P23396 243 aaKnown RBP eCLIP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 PTPN5P54829 565 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 IRX1P78414 480 aaPredicted RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 CYLC2Q14093 348 aaPredicted RBP10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 OR4D1Q15615 310 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 LYPLAL1Q5VWZ2 237 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 NXNQ6DKJ4 435 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 TXNDC11Q6PKC3 985 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 JADE3Q92613 823 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 LMLNQ96KR4 655 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 GPR21Q99679 349 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 TCF25Q9BQ70 676 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 CORO1BQ9BR76 489 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 C1QTNF3Q9BXJ4 246 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 OSBPL1AQ9BXW6 950 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 SLC46A2Q9BY10 475 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 APPL1Q9UKG1 709 aa10.74□□□□□ -0.69
PHACTR4-204ENST00000493669 A0A0J9YYE9 177 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 KLK8O60259 260 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 FKBP6O75344 327 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 TRBC1P01850 177 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 JUNP05412 331 aaKnown RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SERPINA4P29622 427 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 HOXA9P31269 272 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 ATP4BP51164 291 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 MAPRE2Q15555 327 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 C1orf146Q5VVC0 180 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 AAGABQ6PD74 315 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 RIPOR1Q6ZS17 1223 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CLYBLQ8N0X4 340 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 OR2AP1Q8NGE2 309 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 LYSMD1Q96S90 227 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 RAD9AQ99638 391 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 TM6SF2Q9BZW4 377 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 P2RY12Q9H244 342 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 ZMYM5Q9UJ78 669 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 RNF112Q9ULX5 631 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 HS3ST2Q9Y278 367 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 RWDD3Q9Y3V2 267 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CAPN8A6NHC0 703 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 TMEM233B4DJY2 109 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SNRPD1P62314 119 aaKnown RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SLC34A1Q06495 639 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SQLEQ14534 574 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 RCN1Q15293 331 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CCDC6Q16204 474 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 ARHGAP15Q53QZ3 475 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CMPK2Q5EBM0 449 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CTSL3PQ5NE16 218 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 LYSMD3Q7Z3D4 306 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CBARPQ8N350 705 aaPredicted RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 RYBPQ8N488 228 aaPredicted RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 MRPL43Q8N983 215 aaKnown RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 PDLIM5Q96HC4 596 aaKnown RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CATSPER2Q96P56 530 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 SMIM14Q96QK8 99 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 PANX3Q96QZ0 392 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CEP44Q9C0F1 390 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 ZFYVE1Q9HBF4 777 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 EVLQ9UI08 416 aaPredicted RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 CDH22Q9UJ99 828 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 ANGPTL2Q9UKU9 493 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 FAM50BQ9Y247 325 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 COPG1Q9Y678 874 aaKnown RBP10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 LOC100653049A0A140TA62 436 aa10.73□□□□□ -0.69
PHACTR4-204ENST00000493669 A0A1W2PQ67 120 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms