RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 ABHD11Q8NFV4 315 aa11.74□□□□□ -0.53
SMTN-218ENST00000489337 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
SMTN-218ENST00000489337 RAB2BQ8WUD1 216 aa11.74□□□□□ -0.53
SMTN-218ENST00000489337 EFHD2Q96C19 240 aaPredicted RBP11.74□□□□□ -0.53
SMTN-218ENST00000489337 EGFL7Q9UHF1 273 aa11.74□□□□□ -0.53
SMTN-218ENST00000489337 TRPC5OSA6NMA1 111 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 RNF103O00237 685 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 B4GAT1O43505 415 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 KPNA6O60684 536 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 CABYRO75952 493 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 ATP6V1B2P21281 511 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ZNF846Q147U1 533 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 IL31Q6EBC2 164 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ZYG11AQ6WRX3 759 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 SPPL2CQ8IUH8 684 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 LRRC52Q8N7C0 313 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 MAGEE2Q8TD90 523 aaPredicted RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 TKTL2Q9H0I9 626 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 MAP1BP46821 2468 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 APOA4P06727 396 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ARSAP15289 507 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 TPH1P17752 444 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 PSMA4P25789 261 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 AVPR1AP37288 418 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 TNK2Q07912 1038 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 GRSF1Q12849 480 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMTN-218ENST00000489337 INPP5AQ14642 412 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 CLPPQ16740 277 aaPredicted RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 AFAP1L2Q8N4X5 818 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 PDPRQ8NCN5 879 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 PDZD8Q8NEN9 1154 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ACVR1CQ8NER5 493 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 OR13F1Q8NGS4 319 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 FCRL3Q96P31 734 aaPredicted RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 YME1L1Q96TA2 773 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 CD320Q9NPF0 282 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 VANGL2Q9ULK5 521 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 STAP1Q9ULZ2 295 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ERVK-11Q9UQG0 969 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 RUVBL2Q9Y230 463 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 SPTBN5Q9NRC6 3674 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 VPS13AQ96RL7 3174 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 SDHDO14521 159 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ENPP3O14638 875 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 TSPAN3O60637 253 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 SNRPB2P08579 225 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 PSMB4P28070 264 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 PCSK1P29120 753 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 CAPGP40121 348 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 PSMD8P48556 350 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 RTP2Q5QGT7 225 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 C10orf120Q5SQS8 335 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 VARS2Q5ST30 1063 aaKnown RBP11.73□□□□□ -0.53
SMTN-218ENST00000489337 COLGALT2Q8IYK4 626 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 OMDQ99983 421 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 DUSP16Q9BY84 665 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ING2Q9H160 280 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 LRRC40Q9H9A6 602 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 ARMC1Q9NVT9 282 aa11.73□□□□□ -0.53
SMTN-218ENST00000489337 TRIM64A6NGJ6 449 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 TOR1BO14657 336 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 UBDO15205 165 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 MT-CO1P00395 513 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 PNPLA4P41247 253 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 SLC11A1P49279 550 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 ARHGEF6Q15052 776 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 PCSK7Q16549 785 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 SPANXN3Q5MJ09 141 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 ALKAL1Q6UXT8 129 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 PIWIL3Q7Z3Z3 882 aaKnown RBP11.72□□□□□ -0.53
SMTN-218ENST00000489337 CLEC14AQ86T13 490 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 ZDHHC17Q8IUH5 632 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 DDIASQ8IXT1 998 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMTN-218ENST00000489337 ZMIZ2Q8NF64 920 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 SNX19Q92543 992 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 SH3YL1Q96HL8 342 aaPredicted RBP11.72□□□□□ -0.53
SMTN-218ENST00000489337 VPS39Q96JC1 886 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 QKIQ96PU8 341 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMTN-218ENST00000489337 CTRCQ99895 268 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 TUBA1CQ9BQE3 449 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 WDCPQ9H6R7 721 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 CCM2LQ9NUG4 571 aaPredicted RBP11.72□□□□□ -0.53
SMTN-218ENST00000489337 CD300AQ9UGN4 299 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 TMA7Q9Y2S6 64 aaKnown RBP11.72□□□□□ -0.53
SMTN-218ENST00000489337 TRAF6Q9Y4K3 522 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 NRP2O60462 931 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 ALOX5P09917 674 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 ITGB8P26012 769 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 SOX11P35716 441 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 POLR2IP36954 125 aaKnown RBP11.72□□□□□ -0.53
SMTN-218ENST00000489337 HLCSP50747 726 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 MPP1Q00013 466 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 USP10Q14694 798 aaKnown RBP11.72□□□□□ -0.53
SMTN-218ENST00000489337 MAPK11Q15759 364 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 CARTPTQ16568 116 aa11.72□□□□□ -0.53
SMTN-218ENST00000489337 NDUFA5Q16718 116 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms