RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SLC35F3Q8IY50 421 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 SPATA6LQ8N4H0 392 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 ZCCHC9Q8N567 271 aaKnown RBP2.43□□□□□ -2.02
CCDC93-209ENST00000488908 ZNF614Q8N883 585 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 SLC38A5Q8WUX1 472 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 ZNRF4Q8WWF5 429 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 SDCCAG3Q96C92 435 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 ABHD8Q96I13 439 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 TWSG1Q9GZX9 223 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 NDST4Q9H3R1 872 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 BEX4Q9NWD9 120 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-209ENST00000488908 MARCH4Q9P2E8 410 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-209ENST00000488908 KLHL8Q9P2G9 620 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-209ENST00000488908 LRCH1Q9Y2L9 728 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.43□□□□□ -2.02
CCDC93-209ENST00000488908 DERAQ9Y315 318 aa2.43□□□□□ -2.02
CCDC93-209ENST00000488908 CROCCQ5TZA2 2017 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 DUXAA6NLW8 204 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 PRR32B1ATL7 298 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 EIF3DO15371 548 aaKnown RBP eCLIP2.42□□□□□ -2.02
CCDC93-209ENST00000488908 NCAM2O15394 837 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 TSHBP01222 138 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 RPP30P78346 268 aaKnown RBP2.42□□□□□ -2.02
CCDC93-209ENST00000488908 ICA1Q05084 483 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 FOXM1Q08050 763 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 FFAR4Q5NUL3 377 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 FAM83BQ5T0W9 1011 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 ADAMTSL4-AS1Q5T5F5 129 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 IL31Q6EBC2 164 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 SH2D5Q6ZV89 423 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 PLEKHM3Q6ZWE6 761 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 SLC46A3Q7Z3Q1 461 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 LMNTD2Q8IXW0 634 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 ADSSL1Q8N142 457 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 PCDH20Q8N6Y1 951 aaKnown RBP2.42□□□□□ -2.02
CCDC93-209ENST00000488908 GMPPAQ96IJ6 420 aaPredicted RBP2.42□□□□□ -2.02
CCDC93-209ENST00000488908 BBS4Q96RK4 519 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 CD180Q99467 661 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 HERPUD2Q9BSE4 406 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 PELI2Q9HAT8 420 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 BPIFA1Q9NP55 256 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 SAYSD1Q9NPB0 183 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 NLRC4Q9NPP4 1024 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 HINT3Q9NQE9 182 aaKnown RBP2.42□□□□□ -2.02
CCDC93-209ENST00000488908 ATAD3AQ9NVI7 634 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 TMEM181Q9P2C4 612 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 CTNNAL1Q9UBT7 734 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 KCNJ14Q9UNX9 436 aa2.42□□□□□ -2.02
CCDC93-209ENST00000488908 A0A1W2PPI3 338 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 PDE9AO76083 593 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 EDN2P20800 178 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 FASLGP48023 281 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 ARCN1P48444 511 aaKnown RBP2.41□□□□□ -2.02
CCDC93-209ENST00000488908 NEK3P51956 506 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 FOXO1Q12778 655 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 KIR2DS3Q14952 304 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 TAF11Q15544 211 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 C2orf68Q2NKX9 166 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 KRTCAP3Q53RY4 240 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 FRG2Q64ET8 278 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 FBXO46Q6PJ61 603 aaPredicted RBP2.41□□□□□ -2.02
CCDC93-209ENST00000488908 DOK6Q6PKX4 331 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 ANO5Q75V66 913 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 ZBTB2Q8N680 514 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 OR5R1Q8NH85 324 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 THAP6Q8TBB0 222 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 MRGPRDQ8TDS7 321 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 RUBCNQ92622 972 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 NEUROD6Q96NK8 337 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 STN1Q9H668 368 aaKnown RBP2.41□□□□□ -2.02
CCDC93-209ENST00000488908 ZBTB20Q9HC78 741 aaPredicted RBP2.41□□□□□ -2.02
CCDC93-209ENST00000488908 SNTG1Q9NSN8 517 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 ALKBH4Q9NXW9 302 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 SRP68Q9UHB9 627 aaKnown RBP2.41□□□□□ -2.02
CCDC93-209ENST00000488908 ASIC3Q9UHC3 531 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 STK36Q9NRP7 1315 aa2.41□□□□□ -2.02
CCDC93-209ENST00000488908 IGLV7-46A0A075B6I9 117 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 FAM90A7PA6NKC0 464 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 FAM90A22PA8MWA6 464 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 FAM90A12PA8MX19 464 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 FAM90A23PA8MXZ1 464 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 SLCO1B7G3V0H7 640 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 CLPTM1O96005 669 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 MT-CYBP00156 380 aaPredicted RBP2.4□□□□□ -2.03
CCDC93-209ENST00000488908 KRTAP1-4P0C5Y4 121 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 IGHV4-38-2P0DP08 117 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 POU1F1P28069 291 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 CDC25CP30307 473 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 MLLT10P55197 1068 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 CSNK2A1P68400 391 aaPredicted RBP2.4□□□□□ -2.03
CCDC93-209ENST00000488908 KCNJ10P78508 379 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 PPARDQ03181 441 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 CUL4BQ13620 913 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 NAA25Q14CX7 972 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 TIGD6Q17RP2 521 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 BHLHB9Q6PI77 547 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 CPLX2Q6PUV4 134 aaKnown RBP2.4□□□□□ -2.03
CCDC93-209ENST00000488908 MFSD6Q6ZSS7 791 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 LRRTM1Q86UE6 522 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 GPR180Q86V85 440 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms