RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CCDC3Q9BQI4 270 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 DPEP2Q9H4A9 486 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 ZFYVE1Q9HBF4 777 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 ARFGAP3Q9NP61 516 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 NCKIPSDQ9NZQ3 722 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 RSPH14Q9UHP6 348 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 RABGEF1Q9UJ41 708 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 GPSM3Q9Y4H4 160 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 SPO11Q9Y5K1 396 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 AK5Q9Y6K8 562 aa12.22□□□□□ -0.45
MSH5-216ENST00000484309 HACD1B0YJ81 288 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 AURKAO14965 403 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 MTSS1O43312 755 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 NDST3O95803 873 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 ATP1A1P05023 1023 aaKnown RBP12.21□□□□□ -0.45
MSH5-216ENST00000484309 TEAD1P28347 426 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 CHRNA4P43681 627 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 WNT3AP56704 352 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 EIF3EP60228 445 aaKnown RBP12.21□□□□□ -0.45
MSH5-216ENST00000484309 ZNF648Q5T619 568 aaPredicted RBP12.21□□□□□ -0.45
MSH5-216ENST00000484309 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 CCDC70Q6NSX1 233 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 SLC30A9Q6PML9 568 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 LVRNQ6Q4G3 990 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 KDELC1Q6UW63 502 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 NRROSQ86YC3 692 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 NRSN1Q8IZ57 195 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 SDR16C5Q8N3Y7 309 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 IPMKQ8NFU5 416 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 NAT6Q93015 286 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 NXPE2Q96DL1 559 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 HIC2Q96JB3 615 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 DEPDC7Q96QD5 511 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 GPR63Q9BZJ6 419 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 FAM83DQ9H4H8 585 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 SPATS2LQ9NUQ6 558 aaKnown RBP12.21□□□□□ -0.45
MSH5-216ENST00000484309 FAM153AQ9UHL3 310 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 SLC17A4Q9Y2C5 497 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 RAXQ9Y2V3 346 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 PRKAB1Q9Y478 270 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 PCYT1BQ9Y5K3 369 aaPredicted RBP12.21□□□□□ -0.45
MSH5-216ENST00000484309 ST14Q9Y5Y6 855 aa12.21□□□□□ -0.45
MSH5-216ENST00000484309 OAS3Q9Y6K5 1087 aaKnown RBP12.21□□□□□ -0.45
MSH5-216ENST00000484309 DDX3YO15523 660 aaKnown RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 KCNN4O15554 427 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 NOBOXO60393 691 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 IVLP07476 585 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 RBP3P10745 1247 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 PTPN7P35236 360 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 ADCY8P40145 1251 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 CETN2P41208 172 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 MAZP56270 477 aaKnown RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 CTBSQ01459 385 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 ILF3Q12906 894 aaKnown RBP eCLIP12.2□□□□□ -0.46
MSH5-216ENST00000484309 XRCC4Q13426 336 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 SLC14A2Q15849 920 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 SIRPB2Q5JXA9 342 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 HENMT1Q5T8I9 393 aaKnown RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 CDKL3Q8IVW4 592 aaPredicted RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 SYCE1Q8N0S2 351 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 TXLNBQ8N3L3 684 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 UBL4BQ8N7F7 174 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 Q8N9G6 341 aaPredicted RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 GPR26Q8NDV2 337 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 GPR156Q8NFN8 814 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 GPBAR1Q8TDU6 330 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 PATE1Q8WXA2 126 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 COX14Q96I36 57 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 MRGPRX2Q96LB1 330 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 OR2M4Q96R27 311 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 FCRL5Q96RD9 977 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 GORASP1Q9BQQ3 440 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 SPATA16Q9BXB7 569 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 GSDMCQ9BYG8 508 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 BPIFA1Q9NP55 256 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 TAAR2Q9P1P5 351 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 CNOT6Q9ULM6 557 aaKnown RBP12.2□□□□□ -0.46
MSH5-216ENST00000484309 GUCA1BQ9UMX6 200 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 ADGRG1Q9Y653 693 aa12.2□□□□□ -0.46
MSH5-216ENST00000484309 AGRPO00253 132 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 BUD23O43709 281 aaKnown RBP12.19□□□□□ -0.46
MSH5-216ENST00000484309 USP12O75317 370 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 MPOP05164 745 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 RPLP0P05388 317 aaKnown RBP12.19□□□□□ -0.46
MSH5-216ENST00000484309 PYGLP06737 847 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 PSMB4P28070 264 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 ACTR1BP42025 376 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 GSDMDP57764 484 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 ACTR1AP61163 376 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 CCL7P80098 99 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 OLIG2Q13516 323 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 SPIDRQ14159 915 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 C14orf28Q4W4Y0 310 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 RBM44Q6ZP01 1051 aaKnown RBP12.19□□□□□ -0.46
MSH5-216ENST00000484309 TMC3Q7Z5M5 1100 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 NLRP8Q86W28 1048 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 GALNT13Q8IUC8 556 aa12.19□□□□□ -0.46
MSH5-216ENST00000484309 CCDC110Q8TBZ0 833 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms