RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CDH5P33151 784 aaPredicted RBP13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 USF2Q15853 346 aaPredicted RBP13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CRY2Q49AN0 593 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ATAT1Q5SQI0 421 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 C1GALT1C1Q96EU7 318 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 IL1AP01583 271 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 UGT2B4P06133 528 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 VLDLRP98155 873 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ENPEPQ07075 957 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 BNIP2Q12982 314 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SLC13A2Q13183 592 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 EFR3AQ14156 821 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LINGO4Q6UY18 593 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 DCBLD1Q8N8Z6 715 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZNF557Q8N988 423 aaPredicted RBP13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LACRTQ9GZZ8 138 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 COPS7AQ9UBW8 275 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 AGO1Q9UL18 857 aaKnown RBP13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CEP152O94986 1710 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GPRIN3Q6ZVF9 776 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ADAMTS15Q8TE58 950 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 EXOSC8Q96B26 276 aaKnown RBP13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 FBXW2Q9UKT8 454 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MAP4K5Q9Y4K4 846 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ACTL7BQ9Y614 415 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CASKO14936 926 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RARAP10276 462 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZNF132P52740 706 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SCGB2A2Q13296 93 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MSLNQ13421 630 aaPredicted RBP13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CCNYL2Q5T2Q4 361 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KDM7AQ6ZMT4 941 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ARMC5Q96C12 935 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SSR3Q9UNL2 185 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR2AG2A6NM03 316 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MLYCDO95822 493 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PEX6Q13608 980 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PHF19Q5T6S3 580 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DENND5AQ6IQ26 1287 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CPA6Q8N4T0 437 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TTC29Q8NA56 475 aaPredicted RBP13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ACTRT1Q8TDG2 376 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SMG7Q92540 1137 aaKnown RBP13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TMEM168Q9H0V1 697 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DEC1Q9P2X7 70 aa13.21□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 UGT2B17O75795 530 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLITRK3O94933 977 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 IFNGP01579 166 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SNRPB2P08579 225 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ARFIP1P53367 373 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NFKB2Q00653 900 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ARMC10Q8N2F6 343 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 OR5M3Q8NGP4 307 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MED31Q9Y3C7 131 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C1RP00736 705 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C9P02748 559 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FSHRP23945 695 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TKTP29401 623 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C2orf76Q3KRA6 126 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SETD7Q8WTS6 366 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KLHL5Q96PQ7 755 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PPP4CP60510 307 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 BEND5Q7L4P6 421 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SLC25A23Q9BV35 468 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 CDC42BPBQ9Y5S2 1711 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SEC24AO95486 1093 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C22orf31O95567 290 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TCF4P15884 667 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RPL14P50914 215 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 DLG4P78352 724 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 LSM12Q3MHD2 195 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PCID2Q5JVF3 399 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 AFTPHQ6ULP2 937 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 POLR3HQ9Y535 204 aaPredicted RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 PLOD2O00469 737 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RPL22P35268 128 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NAB1Q13506 487 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C2orf27AQ580R0 203 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 ZDHHC20Q5W0Z9 365 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RASGRP3Q8IV61 690 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NKX2-3Q8TAU0 364 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 NDRG1Q92597 394 aaKnown RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 C3orf14Q9HBI5 128 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 FANCFQ9NPI8 374 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 RGS17Q9UGC6 210 aaPredicted RBP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 KDELR1P24390 212 aa13.2□□□□□ -0.3
NPHP3-ACAD11-201ENST00000471702 TTI2Q6NXR4 508 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms