RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GLT6D1Q7Z4J2 308 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 RAB44Q7Z6P3 723 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-205ENST00000454542 SLCO6A1Q86UG4 719 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 HID1Q8IV36 788 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 SLC25A41Q8N5S1 370 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 TRAM1L1Q8N609 369 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 PRELID2Q8N945 189 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 LMX1AQ8TE12 382 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 PTCD2Q8WV60 388 aaKnown RBP14.09□□□□□ -0.15
HDAC4-205ENST00000454542 ADAMTS14Q8WXS8 1223 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 PBKQ96KB5 322 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 C19orf43Q9BQ61 176 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 TBL1YQ9BQ87 522 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 ZSCAN5AQ9BUG6 496 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 BOCQ9BWV1 1114 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 GPR63Q9BZJ6 419 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 FAM83DQ9H4H8 585 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 LRRC40Q9H9A6 602 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 MRPL40Q9NQ50 206 aaKnown RBP14.09□□□□□ -0.15
HDAC4-205ENST00000454542 IL17CQ9P0M4 197 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 VPS18Q9P253 973 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 DRG1Q9Y295 367 aaKnown RBP14.09□□□□□ -0.15
HDAC4-205ENST00000454542 PLXNB3Q9ULL4 1909 aa14.09□□□□□ -0.15
HDAC4-205ENST00000454542 GOLGA6CA6NDK9 693 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 GOLGA6BA6NDN3 693 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 GAPDHSO14556 408 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-205ENST00000454542 FFAR2O15552 330 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 LDOC1O95751 146 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-205ENST00000454542 FUCA1P04066 466 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 GOLGA6DP0CG33 693 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 KCNA4P22459 653 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 MSNP26038 577 aaKnown RBP14.08□□□□□ -0.16
HDAC4-205ENST00000454542 TNNT3P45378 269 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-205ENST00000454542 SEMA5AQ13591 1074 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 CYP1B1Q16678 543 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 C6orf132Q5T0Z8 1188 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 FAXCQ5TGI0 409 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 GLIS1Q8NBF1 620 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 HIC2Q96JB3 615 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 VPS35Q96QK1 796 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 OSBPL9Q96SU4 736 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 GOLGA6AQ9NYA3 693 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 SNX12Q9UMY4 172 aa14.08□□□□□ -0.16
HDAC4-205ENST00000454542 APOBEC2Q9Y235 224 aaKnown RBP14.08□□□□□ -0.16
HDAC4-205ENST00000454542 OAS3Q9Y6K5 1087 aaKnown RBP14.08□□□□□ -0.16
HDAC4-205ENST00000454542 PTPRBP23467 1997 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 ERI2A8K979 691 aaKnown RBP14.07□□□□□ -0.16
HDAC4-205ENST00000454542 DNAJC6O75061 913 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 PPFIA2O75334 1257 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 SUN1O94901 812 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 TNFP01375 233 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 SLC4A1P02730 911 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 CKMT1AP12532 417 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 CKMT2P17540 419 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 FDFT1P37268 417 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 ZNF140P52738 457 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-205ENST00000454542 DNAJC3Q13217 504 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 ILKQ13418 452 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 C1orf61Q13536 156 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 ELOCQ15369 112 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 LONRF2Q1L5Z9 754 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 ZDHHC20Q5W0Z9 365 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 LVRNQ6Q4G3 990 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 TRIM74Q86UV6 250 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 BLOC1S5Q8TDH9 187 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 COG1Q8WTW3 980 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 APOLD1Q96LR9 279 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 APOL2Q9BQE5 337 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 HOMER3Q9NSC5 361 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 SMOXQ9NWM0 555 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 TRNAU1APQ9NX07 287 aaKnown RBP14.07□□□□□ -0.16
HDAC4-205ENST00000454542 PAK5Q9P286 719 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 TMPRSS11EQ9UL52 423 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 SUFUQ9UMX1 484 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 ZNF148Q9UQR1 794 aa14.07□□□□□ -0.16
HDAC4-205ENST00000454542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDAC4-205ENST00000454542 FAM221BA6H8Z2 402 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 PGRMC1O00264 195 aaKnown RBP14.06□□□□□ -0.16
HDAC4-205ENST00000454542 FANCGO15287 622 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 YY2O15391 372 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 PSMD3O43242 534 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 USP12O75317 370 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 RFPL3O75679 317 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 IFNB1P01574 187 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 PSMA3P25788 255 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 SPAM1P38567 509 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 SNX1Q13596 522 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 SPARCL1Q14515 664 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 TAF1AQ15573 450 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-205ENST00000454542 DEFB133Q30KQ1 61 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 ALS2CLQ60I27 953 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 SLC35F3Q8IY50 421 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 PDCD7Q8N8D1 485 aaKnown RBP14.06□□□□□ -0.16
HDAC4-205ENST00000454542 BRSK1Q8TDC3 778 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 GPBAR1Q8TDU6 330 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 GLYATL1Q969I3 302 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 LRRC45Q96CN5 670 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 SPATA16Q9BXB7 569 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 TMEM168Q9H0V1 697 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms