RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CDC42EP5Q6NZY7 148 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 LARP4Q71RC2 724 aaKnown RBP eCLIP16.04■□□□□ 0.16
C9orf3-206ENST00000428313 TMBIM1Q969X1 311 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 TMEM125Q96AQ2 219 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 LRRC58Q96CX6 371 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 ZHX1-C8orf76Q96EF9 292 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 MBOAT4Q96T53 435 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 ALG2Q9H553 416 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 IL1RL2Q9HB29 575 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 PDLIM7Q9NR12 457 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 PLSCR3Q9NRY6 295 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 DNMT3LQ9UJW3 386 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 BOLA1Q9Y3E2 137 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 WDR81Q562E7 1941 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 A0A1W2PQ72 361 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 NR5A2O00482 541 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 CAPN5O15484 640 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 B4GALT4O60513 344 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 TULP3O75386 442 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 AGXTP21549 392 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 PTGS2P35354 604 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 ASPAP45381 313 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 ABCG1P45844 678 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 POLD2P49005 469 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 ISL1P61371 349 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 TGFB2P61812 414 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 TRAF3Q13114 568 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 IL18R1Q13478 541 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 PYCR3Q53H96 274 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 KCNMB4Q86W47 210 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 PROSER1Q86XN7 944 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 NAT16Q8N8M0 369 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 FBLIM1Q8WUP2 373 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 REXO5Q96IC2 774 aaKnown RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 GPR78Q96P69 363 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 NXF2Q9GZY0 626 aaKnown RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 RHOJQ9H4E5 214 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 USE1Q9NZ43 259 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 MYO18AQ92614 2054 aaKnown RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 C12orf71A8MTZ7 269 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 DGAT1O75907 488 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 NAT2P11245 290 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 ARSAP15289 507 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 CYP2A7P20853 494 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 ARNTP27540 789 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 BNC1Q01954 994 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 MVKQ03426 396 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 MFSD10Q14728 455 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 CDO1Q16878 200 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 SCYL2Q6P3W7 929 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 CYP20A1Q6UW02 462 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 HHIPL2Q6UWX4 724 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 SPATC1Q76KD6 591 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 TRMT1LQ7Z2T5 733 aaKnown RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 NOXA1Q86UR1 476 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 DEPDC4Q8N2C3 294 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 TXNDC5Q8NBS9 432 aaKnown RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 SDCCAG3Q96C92 435 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 BIRC7Q96CA5 298 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 MRPL57Q9BQC6 102 aaKnown RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 POMKQ9H5K3 350 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 WDR6Q9NNW5 1121 aaKnown RBP16.03■□□□□ 0.16
C9orf3-206ENST00000428313 ACOT9Q9Y305 439 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 FIS1Q9Y3D6 152 aa16.03■□□□□ 0.16
C9orf3-206ENST00000428313 HMX3A6NHT5 357 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 PTGES3LE9PB15 166 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 TCF3P15923 654 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 GTF2E2P29084 291 aaKnown RBP16.02■□□□□ 0.16
C9orf3-206ENST00000428313 RYKP34925 604 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 GGT5P36269 586 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 KPNA2P52292 529 aaKnown RBP16.02■□□□□ 0.16
C9orf3-206ENST00000428313 EEFSECP57772 596 aaKnown RBP16.02■□□□□ 0.16
C9orf3-206ENST00000428313 EN1Q05925 392 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-206ENST00000428313 POU5F1BQ06416 359 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 USP10Q14694 798 aaKnown RBP16.02■□□□□ 0.16
C9orf3-206ENST00000428313 PLEKHG6Q3KR16 790 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 C5orf22Q49AR2 442 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 UTS2BQ765I0 119 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 CUZD1Q86UP6 607 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 STK32CQ86UX6 486 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 OSTM1Q86WC4 334 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 BRSK2Q8IWQ3 736 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 SLC22A15Q8IZD6 547 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 PARP16Q8N5Y8 322 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 DNERQ8NFT8 737 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 RDM1Q8NG50 284 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 CPB2Q96IY4 423 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 CITED4Q96RK1 184 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 TWNKQ96RR1 684 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 CYP2S1Q96SQ9 504 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 C2orf49Q9BVC5 232 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-206ENST00000428313 TARS2Q9BW92 718 aaKnown RBP16.02■□□□□ 0.16
C9orf3-206ENST00000428313 AMBRA1Q9C0C7 1298 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 DCSTAMPQ9H295 470 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 SMOC2Q9H3U7 446 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 AASDHPPTQ9NRN7 309 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms