RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 MARCKSL1P49006 195 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 CDK18Q07002 472 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 CCDC173Q0VFZ6 552 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 HLTFQ14527 1009 aaKnown RBP eCLIP18.32■□□□□ 0.52
GPC1-205ENST00000427506 PRKD1Q15139 912 aaPredicted RBP18.32■□□□□ 0.52
GPC1-205ENST00000427506 LYSMD3Q7Z3D4 306 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 PDZD3Q86UT5 571 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 WDR36Q8NI36 951 aaKnown RBP18.32■□□□□ 0.52
GPC1-205ENST00000427506 TEKT5Q96M29 485 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 ZFYVE1Q9HBF4 777 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 EPB41L5Q9HCM4 733 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 THSD1Q9NS62 852 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 UBP1Q9NZI7 540 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 APPL1Q9UKG1 709 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 SHOC2Q9UQ13 582 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 ZFHX4Q86UP3 3567 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 CCDC187A0A096LP49 1063 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 A0A1W2PQM1 296 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 RGSL1A5PLK6 1076 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 RHPN2P1A8MT19 583 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 TMX2-CTNND1H3BSU7 103 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 MTSS1O43312 755 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 NUDT21O43809 227 aaKnown RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 PMPCBO75439 489 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 ACTR1BP42025 376 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 TNNT3P45378 269 aaPredicted RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 INHBCP55103 352 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 MAZP56270 477 aaKnown RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 PCBP4P57723 403 aaKnown RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 ERVPABLB-1P60509 514 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 ACTR1AP61163 376 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 ADCY2Q08462 1091 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 CCDC181Q5TID7 509 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 GALNT13Q8IUC8 556 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 ZNF248Q8NDW4 579 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 KRT35Q92764 455 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 NAF1Q96HR8 494 aaKnown RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 COX14Q96I36 57 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 CALR3Q96L12 384 aaKnown RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 TRIB3Q96RU7 358 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 HEMGNQ9BXL5 484 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 GPR63Q9BZJ6 419 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 STRADBQ9C0K7 418 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 KLHL8Q9P2G9 620 aaPredicted RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 ZNHIT2Q9UHR6 403 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 PLEKHM1Q9Y4G2 1056 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 ANKRD11Q6UB99 2663 aaPredicted RBP18.31■□□□□ 0.52
GPC1-205ENST00000427506 ADAMTS20P59510 1910 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 APC2O95996 2303 aa18.31■□□□□ 0.52
GPC1-205ENST00000427506 D6RAR5 112 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 DXOO77932 396 aaKnown RBP18.3■□□□□ 0.52
GPC1-205ENST00000427506 ECEL1O95672 775 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 ATP1A1P05023 1023 aaKnown RBP18.3■□□□□ 0.52
GPC1-205ENST00000427506 PDX1P52945 283 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 SLC14A2Q15849 920 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 PYCR3Q53H96 274 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 HENMT1Q5T8I9 393 aaKnown RBP18.3■□□□□ 0.52
GPC1-205ENST00000427506 ALS2CLQ60I27 953 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 PID1Q7Z2X4 250 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 SPRED1Q7Z699 444 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 GAS2L3Q86XJ1 694 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 ARL14Q8N4G2 192 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 SCARF2Q96GP6 870 aaPredicted RBP18.3■□□□□ 0.52
GPC1-205ENST00000427506 TMEM74Q96NL1 305 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 WDR24Q96S15 920 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 SPATA16Q9BXB7 569 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 FOXP3Q9BZS1 431 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 MAGEE1Q9HCI5 957 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 ATXN7L1Q9ULK2 861 aaPredicted RBP18.3■□□□□ 0.52
GPC1-205ENST00000427506 ZNF711Q9Y462 761 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 PCDHGA8Q9Y5G5 932 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 ASXL3Q9C0F0 2248 aa18.3■□□□□ 0.52
GPC1-205ENST00000427506 ACACAQ13085 2346 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 URB1O60287 2271 aaKnown RBP18.29■□□□□ 0.52
GPC1-205ENST00000427506 A0A1W2PNU3 283 aaPredicted RBP18.29■□□□□ 0.52
GPC1-205ENST00000427506 RCCD1A6NED2 376 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 ZW10O43264 779 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 NDST3O95803 873 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 NFKB1P19838 968 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 FECHP22830 423 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 ALDH4A1P30038 563 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 WASHC5Q12768 1159 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 PPP2R5EQ16537 467 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 RAD9BQ6WBX8 426 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 B3GNT8Q7Z7M8 397 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 KIAA1328Q86T90 577 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 PATE1Q8WXA2 126 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 HTR3CQ8WXA8 447 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 TADA1Q96BN2 335 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 LIN37Q96GY3 246 aaPredicted RBP18.29■□□□□ 0.52
GPC1-205ENST00000427506 CRELD1Q96HD1 420 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 SLC46A1Q96NT5 459 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 ASCL3Q9NQ33 180 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 RAD18Q9NS91 495 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 VPS18Q9P253 973 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 FAM153AQ9UHL3 310 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 PRKAB1Q9Y478 270 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 ST14Q9Y5Y6 855 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 DUSP10Q9Y6W6 482 aa18.29■□□□□ 0.52
GPC1-205ENST00000427506 MACROD2A1Z1Q3 448 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms