RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 COQ10AQ96MF6 247 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 RANBP9Q96S59 729 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 LRRC19Q9H756 370 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 RWDD2AQ9UIY3 292 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 SUFUQ9UMX1 484 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 ST14Q9Y5Y6 855 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 CCDC168Q8NDH2 2452 aa9.38□□□□□ -0.91
NEDD9-203ENST00000397378 DIDO1Q9BTC0 2240 aaKnown RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 ARGFXA6NJG6 315 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 PRAMEF11O60813 436 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 IVLP07476 585 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 MMEP08473 750 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 ZNF28P17035 718 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 MMP8P22894 467 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 ITGA3P26006 1051 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 TEAD1P28347 426 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 ADCY8P40145 1251 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 RGRP47804 291 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 ITGA1P56199 1179 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 CDK3Q00526 305 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 CTBSQ01459 385 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 BCL2L1Q07817 233 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 NSUN2Q08J23 767 aaKnown RBP eCLIP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 ACOX1Q15067 660 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 PAPD7Q5XG87 772 aaKnown RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 WDR74Q6RFH5 385 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 C6orf15Q6UXA7 325 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 LYSMD3Q7Z3D4 306 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 NOP9Q86U38 636 aaKnown RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 ZNF677Q86XU0 584 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 PYROXD2Q8N2H3 581 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 CISD2Q8N5K1 135 aaKnown RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 TSEN2Q8NCE0 465 aaKnown RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 GALNT6Q8NCL4 622 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 JOSD2Q8TAC2 188 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 FAM172AQ8WUF8 416 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 NUS1Q96E22 293 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 SCARF2Q96GP6 870 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 PKNOX2Q96KN3 472 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 MLXIPLQ9NP71 852 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 G3BP2Q9UN86 482 aaKnown RBP9.37□□□□□ -0.91
NEDD9-203ENST00000397378 SLC17A4Q9Y2C5 497 aa9.37□□□□□ -0.91
NEDD9-203ENST00000397378 SPG11Q96JI7 2443 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 FAM170AA1A519 330 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 J3KR12 359 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 FGF10O15520 208 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-203ENST00000397378 CYP1A1P04798 512 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-203ENST00000397378 DRD2P14416 443 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 HTR7P34969 479 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 ACTR1BP42025 376 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 MTIF2P46199 727 aaKnown RBP9.36□□□□□ -0.91
NEDD9-203ENST00000397378 GNPDA1P46926 289 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 NDST2P52849 883 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 AIF1P55008 147 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 GSCP56915 257 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-203ENST00000397378 ACTR1AP61163 376 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 MAN2A1Q16706 1144 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 CBARPQ8N350 705 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-203ENST00000397378 OR10G6Q8NH81 332 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
NEDD9-203ENST00000397378 NAA15Q9BXJ9 866 aaKnown RBP9.36□□□□□ -0.91
NEDD9-203ENST00000397378 ING2Q9H160 280 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 COPG2Q9UBF2 871 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 PCDHGB7Q9Y5F8 929 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 FHOD1Q9Y613 1164 aa9.36□□□□□ -0.91
NEDD9-203ENST00000397378 A0A1W2PQ67 120 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 CREB3O43889 395 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 PALMO75781 387 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 RECKO95980 971 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 KRT3P12035 628 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 COX6B1P14854 86 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 GPD1P21695 349 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-203ENST00000397378 FOXM1Q08050 763 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 DNASE1L3Q13609 305 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 RFTN1Q14699 578 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-203ENST00000397378 CNGA3Q16281 694 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-203ENST00000397378 KLHDC7AQ5VTJ3 777 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 WDR59Q6PJI9 974 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 PHLDB2Q86SQ0 1253 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 CDH24Q86UP0 819 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 ZNF761Q86XN6 746 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-203ENST00000397378 HPS6Q86YV9 775 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 RBMXL3Q8N7X1 1067 aaKnown RBP9.35□□□□□ -0.91
NEDD9-203ENST00000397378 SLC37A2Q8TED4 501 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 PTCD2Q8WV60 388 aaKnown RBP9.35□□□□□ -0.91
NEDD9-203ENST00000397378 THAP4Q8WY91 577 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 DTD2Q96FN9 168 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 OR2M4Q96R27 311 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 SLC38A3Q99624 504 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 NDST4Q9H3R1 872 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 ACTL8Q9H568 366 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms