RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 GRM2Q14416 872 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 RAB30Q15771 203 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 C12orf66Q96MD2 445 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 PRDM12Q9H4Q4 367 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 CACNG4Q9UBN1 327 aa17.39■□□□□ 0.38
MCF2L-208ENST00000397030 ITGA2P17301 1181 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ACADLP28330 430 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 PCBP1Q15365 356 aaKnown RBP eCLIP17.39■□□□□ 0.37
MCF2L-208ENST00000397030 WDR93Q6P2C0 686 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 TRIM40Q6P9F5 258 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 CLP1Q92989 425 aaKnown RBP17.39■□□□□ 0.37
MCF2L-208ENST00000397030 CRELD1Q96HD1 420 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 GMPPBQ9Y5P6 360 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ACTL7BQ9Y614 415 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 SPAM1P38567 509 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 RPP38P78345 283 aaKnown RBP17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ADAMTSL2Q86TH1 951 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 TMEM27Q9HBJ8 222 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ZNF222Q9UK12 451 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 CDC42BPAQ5VT25 1732 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 A8MUI8 341 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 PDE9AO76083 593 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 SLC35G6P0C7Q6 338 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ACADSP16219 412 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ILF2Q12905 390 aaKnown RBP17.39■□□□□ 0.37
MCF2L-208ENST00000397030 HSPB3Q12988 150 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 CRHR2Q13324 411 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ARHGAP36Q6ZRI8 547 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 PJA1Q8NG27 643 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 SLC25A23Q9BV35 468 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 SIN3BO75182 1162 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 CLPTM1O96005 669 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 ERBB2P04626 1255 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 C2orf80Q0P641 193 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 OR4K2Q8NGD2 314 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 BTN2A3PQ96KV6 586 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 EPB41L1Q9H4G0 881 aa17.39■□□□□ 0.37
MCF2L-208ENST00000397030 PIAS1O75925 651 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 VARSP26640 1264 aaKnown RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CASP5P51878 434 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 MRPS35P82673 323 aaKnown RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 KCNK18Q7Z418 384 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 GPR180Q86V85 440 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 ULK2Q8IYT8 1036 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 SLC47A1Q96FL8 570 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CEP44Q9C0F1 390 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 TM7SF2O76062 418 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 SNUPNO95149 360 aaKnown RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 GRIA3P42263 894 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 LSM3P62310 102 aaKnown RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 NAE1Q13564 534 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 NOL6Q9H6R4 1146 aaKnown RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 DNAJC18Q9H819 358 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 DIP2BQ9P265 1576 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 NAXEQ8NCW5 288 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CYB5D2Q8WUJ1 264 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.38■□□□□ 0.379e-7■■■■□ 19.4
MCF2L-208ENST00000397030 ZNF846Q147U1 533 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 ZBTB6Q15916 424 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CPTPQ5TA50 214 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 PGBD2Q6P3X8 592 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 TMEM220Q6QAJ8 160 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 KDM7AQ6ZMT4 941 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CXXC5Q7LFL8 322 aaKnown RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 UBE2J2Q8N2K1 259 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 ACSS2Q9NR19 701 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CKLFQ9UBR5 152 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 MORF4L1Q9UBU8 362 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 GTF2IRD1Q9UHL9 959 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CEP170BQ9Y4F5 1589 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 RECQL5O94762 991 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 JMJD7P0C870 316 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 SATL1Q86VE3 508 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 EXOC3L1Q86VI1 746 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 MAPRE3Q9UPY8 281 aa17.38■□□□□ 0.37
MCF2L-208ENST00000397030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
MCF2L-208ENST00000397030 CHADO15335 359 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 TPST2O60704 377 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 IRAK1P51617 712 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 CHST4Q8NCG5 386 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 HEXDCQ8WVB3 486 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 TMEM51Q9NW97 253 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 SPATA6Q9NWH7 488 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 UBIAD1Q9Y5Z9 338 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 SLC38A8A6NNN8 435 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 HMGB3O15347 200 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 SMPD1P17405 629 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 DDX6P26196 483 aaKnown RBP eCLIP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 BLKP51451 505 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 MRPS22P82650 360 aaKnown RBP17.37■□□□□ 0.37
MCF2L-208ENST00000397030 CCL14Q16627 93 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 FBXO48Q5FWF7 155 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.37■□□□□ 0.372e-7■■■■□ 25.6
MCF2L-208ENST00000397030 NKD1Q969G9 470 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 C9orf16Q9BUW7 83 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 PSMD10O75832 226 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 PROCP04070 461 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 ADRA1DP25100 572 aa17.37■□□□□ 0.37
MCF2L-208ENST00000397030 GPD2P43304 727 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms