RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 GPR21Q99679 349 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 ZFYVE1Q9HBF4 777 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 ABCB8Q9NUT2 735 aa16.08■□□□□ 0.16
SNX6-202ENST00000396526 LEFTY2O00292 366 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 AIM2O14862 343 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 SNX2O60749 519 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 KCNA5P22460 613 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 SP100P23497 879 aaPredicted RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 ITGB8P26012 769 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 SULT2A1Q06520 285 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 PLEKHG6Q3KR16 790 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 SNX32Q86XE0 403 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 TTC30BQ8N4P2 665 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 ALG14Q96F25 216 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 CLPBQ9H078 707 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 IL17CQ9P0M4 197 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 SLC7A8Q9UHI5 535 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 CHD5Q8TDI0 1954 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 KIAA0100Q14667 2235 aaKnown RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 GFRA2O00451 464 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 PRMT5O14744 637 aaPredicted RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 UBDO15205 165 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 SLC34A1Q06495 639 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 LYPLAL1Q5VWZ2 237 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 PTRHD1Q6GMV3 140 aaKnown RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 TXNDC11Q6PKC3 985 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 CAMK1DQ8IU85 385 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 APCDD1Q8J025 514 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 JADE3Q92613 823 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 KCNJ9Q92806 393 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 C19orf43Q9BQ61 176 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 SLC25A13Q9UJS0 675 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 CXorf51AA0A1B0GTR3 108 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 GREM1O60565 184 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 MT-CO1P00395 513 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 GM2AP17900 193 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 CPOXP36551 454 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 NUDT2P50583 147 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 TBL3Q12788 808 aaKnown RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 LMAN2Q12907 356 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 STX5Q13190 355 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 EFL1Q7Z2Z2 1120 aaKnown RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■□□□□ 9.2
SNX6-202ENST00000396526 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 PTERQ96BW5 349 aa16.07■□□□□ 0.16
SNX6-202ENST00000396526 PRPF19Q9UMS4 504 aaKnown RBP16.07■□□□□ 0.16
SNX6-202ENST00000396526 H3BMM5 538 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 CCL16O15467 120 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 FZD6O60353 706 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 PTPN2P17706 415 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 CTPS1P17812 591 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 ACTR3P61158 418 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 HTRA4P83105 476 aaPredicted RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 RIPOR1Q6ZS17 1223 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 TMC8Q8IU68 726 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 WDR60Q8WVS4 1066 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 ASIC4Q96FT7 647 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 SARS2Q9NP81 518 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 STX18Q9P2W9 335 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 NKX1-2Q9UD57 310 aaPredicted RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 OAS3Q9Y6K5 1087 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 SDHDO14521 159 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 ADARP55265 1226 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 SESN3P58005 492 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 MUM1Q2TAK8 710 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 KCNV2Q8TDN2 545 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 SH3RF2Q8TEC5 729 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 CLP1Q92989 425 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 MAELQ96JY0 434 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 RAD9AQ99638 391 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 GSTO2Q9H4Y5 243 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 C1orf232A0A0U1RR37 186 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 UBXN8O00124 270 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 BTN3A1O00481 513 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 CHEK2O96017 543 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 CTNNB1P35222 781 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 VHLP40337 213 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 RGS4P49798 205 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 CCNG1P51959 295 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 TAF11Q15544 211 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 MMEL1Q495T6 779 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 ACCSLQ4AC99 568 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 PSAPL1Q6NUJ1 521 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 LYSMD3Q7Z3D4 306 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 OR2AP1Q8NGE2 309 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 NSMCE3Q96MG7 304 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 MRPL1Q9BYD6 325 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 MRPL40Q9NQ50 206 aaKnown RBP16.06■□□□□ 0.16
SNX6-202ENST00000396526 IRAK3Q9Y616 596 aa16.06■□□□□ 0.16
SNX6-202ENST00000396526 GRM6O15303 877 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 GJA1P17302 382 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 RECQLP46063 649 aaPredicted RBP16.05■□□□□ 0.16
SNX6-202ENST00000396526 BTKQ06187 659 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 SQLEQ14534 574 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 UNC50Q53HI1 259 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 LEMD2Q8NC56 503 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 WFDC5Q8TCV5 224 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 CLPTM1LQ96KA5 538 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms