RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 KIF26AQ9ULI4 1882 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PRR5-ARHGAP8B1AHC4 643 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GRID2O43424 1007 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PAPLNO95428 1278 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ATP6V1G2O95670 118 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ESR1P03372 595 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 IMPDH1P20839 514 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SP100P23497 879 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ATP6V0D1P61421 351 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ARHGAP8P85298 464 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 UBAP2LQ14157 1087 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SNCBQ16143 134 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PTPRNQ16849 979 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MYLK3Q32MK0 819 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SLC9B1Q4ZJI4 515 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 FRMD7Q6ZUT3 714 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GRASPQ7Z6J2 395 aaPredicted RBP17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 LONP2Q86WA8 852 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SPNS2Q8IVW8 549 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KDM1BQ8NB78 822 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MOCOSQ96EN8 888 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 RPL10LQ96L21 214 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SLC2A11Q9BYW1 496 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 STK38LQ9Y2H1 464 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SLC30A1Q9Y6M5 507 aa17.92■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GAPDHSO14556 408 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SLC9A3R1O14745 358 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SMIM24O75264 130 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 VPS26AO75436 327 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 WFS1O76024 890 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ENO1P06733 434 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TYRP14679 529 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MYOGP15173 224 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CEBPBP17676 345 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 WEE1P30291 646 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KCNC1P48547 511 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CTSL3PQ5NE16 218 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PLPP6Q8IY26 295 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CBARPQ8N350 705 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 NKAPQ8N5F7 415 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KCNJ9Q92806 393 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KIAA1191Q96A73 305 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 FAR2Q96K12 515 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ATOH8Q96SQ7 321 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 LBHD1Q9BQE6 289 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CCDC28BQ9BUN5 200 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CADM1Q9BY67 442 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 P2RY12Q9H244 342 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 EML4Q9HC35 981 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TCF7L2Q9NQB0 619 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ACSS2Q9NR19 701 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TAS2R1Q9NYW7 299 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 HCFC2Q9Y5Z7 792 aa17.91■□□□□ 0.46
HLA-DQB1-201ENST00000374943 C1orf232A0A0U1RR37 186 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 H3BMM5 538 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TPBGLP0DKB5 382 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GKP32189 559 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 HNF1BP35680 557 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PTPN5P54829 565 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ECT2LQ008S8 904 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 RAD51Q06609 339 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CARD16Q5EG05 197 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 LY6G5CQ5SRR4 150 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PAQR3Q6TCH7 311 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 RINLQ6ZS11 566 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZSWIM9Q86XI8 627 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 RYBPQ8N488 228 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TEX9Q8N6V9 391 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZSWIM3Q96MP5 696 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GPR21Q99679 349 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 LINC00597Q9H2U6 94 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 MMADHCQ9H3L0 296 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GSTO2Q9H4Y5 243 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CYP4F12Q9HCS2 524 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 APPL1Q9UKG1 709 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PCDHB1Q9Y5F3 818 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 CHD7Q9P2D1 2997 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TRBV5-4A0A0C4DH59 114 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 A0A0U1RQS6 177 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 A0A1W2PQ67 120 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SPECC1L-ADORA2AF8WAN1 911 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GYG2O15488 501 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 GSC2O15499 205 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 KERAO60938 352 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 POP4O95707 220 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 RPS3P23396 243 aaKnown RBP eCLIP17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PRDX6P30041 224 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 PPARGP37231 505 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ERVK-21P61565 698 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 HERVK_113P63132 956 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 OR4D1Q15615 310 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZNF678Q5SXM1 525 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SNX20Q7Z614 316 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ADIPOR2Q86V24 386 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TMPRSS6Q8IU80 811 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ADGRG2Q8IZP9 1017 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 AHI1Q8N157 1196 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 AGR3Q8TD06 166 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ZNF641Q96N77 438 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms