RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 CCDC103Q8IW40 242 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 TBATAQ96M53 351 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 FBXO10Q9UK96 956 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 SLC27A6Q9Y2P4 619 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.45□□□□□ -0.74
NUP188-201ENST00000372577 STK16O75716 305 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 IL1BP01584 269 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 NMBRP28336 390 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 RGS1Q08116 209 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 PPIGQ13427 754 aaKnown RBP eCLIP10.45□□□□□ -0.745e-7■■□□□ 13.4
NUP188-201ENST00000372577 KCNJ11Q14654 390 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 PAFAH1B3Q15102 231 aaKnown RBP10.45□□□□□ -0.74
NUP188-201ENST00000372577 NRF1Q16656 503 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 NAIF1Q69YI7 327 aaPredicted RBP10.45□□□□□ -0.74
NUP188-201ENST00000372577 SULT1C3Q6IMI6 304 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 OLFML1Q6UWY5 402 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 RD3Q7Z3Z2 195 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 DNAJB8Q8NHS0 232 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 MYDGFQ969H8 173 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 MIEF2Q96C03 454 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 CXorf40BQ96DE9 158 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 CDH22Q9UJ99 828 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 PRDM4Q9UKN5 801 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 A0A0U1RQF3 1178 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 PEX10O60683 326 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 HSMCR30P0CW71 290 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 ZNHIT3Q15649 155 aaPredicted RBP10.45□□□□□ -0.74
NUP188-201ENST00000372577 NEDD8Q15843 81 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 INAQ16352 499 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 RFTN2Q52LD8 501 aaPredicted RBP10.45□□□□□ -0.74
NUP188-201ENST00000372577 MTX3Q5HYI7 312 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 CNSTQ6PJW8 725 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 RASAL3Q86YV0 1011 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 RBM15BQ8NDT2 890 aaKnown RBP10.45□□□□□ -0.74
NUP188-201ENST00000372577 GPR21Q99679 349 aa10.45□□□□□ -0.74
NUP188-201ENST00000372577 COPG1Q9Y678 874 aaKnown RBP10.45□□□□□ -0.74
NUP188-201ENST00000372577 SERPINB7O75635 380 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 IL1R2P27930 398 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CDH13P55290 713 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 MPP1Q00013 466 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CLCQ05315 142 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CPSF6Q16630 551 aaKnown RBP eCLIP10.44□□□□□ -0.74
NUP188-201ENST00000372577 SLC44A4Q53GD3 710 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 TAPT1Q6NXT6 567 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 C11orf74Q86VG3 221 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 NETO2Q8NC67 525 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 BTN2A2Q8WVV5 523 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 DDX1Q92499 740 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 AGAP2Q99490 1192 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 TDRD1Q9BXT4 1180 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 UNC93B1Q9H1C4 597 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 LRTM1Q9HBL6 345 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 MIOSQ9NXC5 875 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 HMGXB4Q9UGU5 601 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 POLR3HQ9Y535 204 aaPredicted RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 NEDD8-MDP1E9PL57 170 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CACNB4O00305 520 aaPredicted RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 CST1P01037 141 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CTSEP14091 401 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CCNA2P20248 432 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 POLR2JP52435 117 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 ABRQ12979 859 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CHSY3Q70JA7 882 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 DSELQ8IZU8 1212 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 ZCCHC7Q8N3Z6 543 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 SPATA22Q8NHS9 363 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CD99L2Q8TCZ2 262 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 ZNF607Q96SK3 696 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 TFB2MQ9H5Q4 396 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 HMG20AQ9NP66 347 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 SLC9A8Q9Y2E8 581 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 COMMD3-BMI1R4GMX3 469 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 RGPD5Q99666 1765 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 KLF11O14901 512 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CLDN9O95484 217 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CCDC159P0C7I6 412 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 TSPAN8P19075 237 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 ACLYP53396 1101 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 PWP1Q13610 501 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 CCDC92Q53HC0 331 aaPredicted RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 ESRP1Q6NXG1 681 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 TMEM192Q8IY95 271 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 OR2T12Q8NG77 320 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 DEC1Q9P2X7 70 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 FAM159BA6NKW6 160 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 GOT2P00505 430 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 C8GP07360 202 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 C4BPBP20851 252 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 RALGPS1Q5JS13 557 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 TYW3Q6IPR3 259 aaKnown RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 OR2T34Q8NGX1 318 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 OR2T3Q8NH03 318 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 C8orf48Q96LL4 319 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 TEPSINQ96N21 525 aa10.44□□□□□ -0.74
NUP188-201ENST00000372577 GATA5Q9BWX5 397 aaPredicted RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 WDR55Q9H6Y2 383 aaPredicted RBP10.44□□□□□ -0.74
NUP188-201ENST00000372577 MINDY3Q9H8M7 445 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms