RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 GPR21Q99679 349 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 SLC30A3Q99726 388 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.02■□□□□ 0.485e-6■■■■■ 35.1
UBQLN4-201ENST00000368309 EGFL7Q9UHF1 273 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 ENPP3O14638 875 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 KIF3CO14782 793 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 OR1I1O60431 355 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 TIPRLO75663 272 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 FGF4P08620 206 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 NELFEP18615 380 aaKnown RBP18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 CAPN3P20807 821 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 SOX11P35716 441 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 SUOXP51687 545 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 DHFR2Q86XF0 187 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 FBXO39Q8N4B4 442 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 GKN1Q9NS71 199 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 MARCH5Q9NX47 278 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 TAS2R13Q9NYV9 303 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 ANKRD12Q6UB98 2062 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 VWA8A3KMH1 1905 aa18.02■□□□□ 0.48
UBQLN4-201ENST00000368309 A0A1B0GTW7 788 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 CBX4O00257 560 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 SCAMP3O14828 347 aaKnown RBP18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 ACSL4O60488 711 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 RPL17P18621 184 aaKnown RBP18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 ATF6P18850 670 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 DIO3P55073 304 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 PTPRNQ16849 979 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 DCBLD1Q8N8Z6 715 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 STAG3L4Q8TBR4 150 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 NAT14Q8WUY8 206 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 CANT1Q8WVQ1 401 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF512Q96ME7 567 aaPredicted RBP18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 TFB2MQ9H5Q4 396 aaKnown RBP18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 UBA2Q9UBT2 640 aaPredicted RBP18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 SEPT3Q9UH03 358 aa18.02■□□□□ 0.47
UBQLN4-201ENST00000368309 ADAM12O43184 909 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 TSPAN3O60637 253 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 ECI2O75521 394 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 CRCPO75575 148 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 CKMT2P17540 419 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 OGNP20774 298 aaKnown RBP18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 SGSHP51688 502 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 LAMB3Q13751 1172 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 FUT10Q6P4F1 479 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 PIANPQ8IYJ0 282 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 MIER2Q8N344 545 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 BBS5Q8N3I7 341 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 EFHBQ8N7U6 833 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 PCYOX1LQ8NBM8 494 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 LPCAT1Q8NF37 534 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 RHEBL1Q8TAI7 183 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 MGME1Q9BQP7 344 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 GRIP2Q9C0E4 1043 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 NLE1Q9NVX2 485 aaPredicted RBP18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 TMEM161AQ9NX61 479 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 POLG2Q9UHN1 485 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 SLC38A8A6NNN8 435 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 CAPNS1P04632 268 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 TRAP1Q12931 704 aaKnown RBP18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 C8orf82Q6P1X6 216 aaPredicted RBP18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 C16orf59Q7L2K0 433 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 MFN1Q8IWA4 741 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 MYO1HQ8N1T3 1032 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 DBF4BQ8NFT6 615 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 KIAA1191Q96A73 305 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 NPEPPSL1A6NEC2 478 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 NME4O00746 187 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 PRLP01236 227 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF140P52738 457 aaPredicted RBP18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 OXCT1P55809 520 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 TYSND1Q2T9J0 566 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 PHYKPLQ8IUZ5 450 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 TTC16Q8NEE8 873 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 PEX13Q92968 403 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 PSKH2Q96QS6 385 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 SYTL2Q9HCH5 934 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 TSR3Q9UJK0 312 aaKnown RBP18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 PCDHB7Q9Y5E2 793 aa18.01■□□□□ 0.47
UBQLN4-201ENST00000368309 TCRBV3S1A0A5B6 114 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 BTN3A1O00481 513 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 FAM58BPP0C7Q3 252 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 ATP6V1B2P21281 511 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 CYTH1Q15438 398 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 KANK2Q63ZY3 851 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 HMBOX1Q6NT76 420 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 METTL25Q8N6Q8 603 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 MAGEH1Q9H213 219 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 AURKCQ9UQB9 309 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 LAMA2P24043 3122 aaKnown RBP18■□□□□ 0.47
UBQLN4-201ENST00000368309 ANGPT2O15123 496 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 INSIG1O15503 277 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 GPR39O43194 453 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 ZDHHC11BP0C7U3 371 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 SLC7A1P30825 629 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 APLP1P51693 650 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 IKBKEQ14164 716 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 PSAPL1Q6NUJ1 521 aa18■□□□□ 0.47
UBQLN4-201ENST00000368309 LINGO4Q6UY18 593 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms