RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 MYCLP1P12525 358 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 HNRNPLP14866 589 aaKnown RBP eCLIP7.49□□□□□ -1.219e-6■□□□□ 8.2
APP-206ENST00000359726 PDGFRAP16234 1089 aa7.49□□□□□ -1.21
APP-206ENST00000359726 STX1BP61266 288 aa7.49□□□□□ -1.21
APP-206ENST00000359726 NCS1P62166 190 aa7.49□□□□□ -1.21
APP-206ENST00000359726 SLC35A2P78381 396 aa7.49□□□□□ -1.21
APP-206ENST00000359726 CCNA1P78396 465 aa7.49□□□□□ -1.21
APP-206ENST00000359726 PARP15Q460N3 678 aa7.49□□□□□ -1.21
APP-206ENST00000359726 SNAP47Q5SQN1 464 aa7.49□□□□□ -1.21
APP-206ENST00000359726 OTUD1Q5VV17 481 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 PNCKQ6P2M8 343 aa7.49□□□□□ -1.21
APP-206ENST00000359726 LAYNQ6UX15 382 aa7.49□□□□□ -1.21
APP-206ENST00000359726 SPATC1Q76KD6 591 aa7.49□□□□□ -1.21
APP-206ENST00000359726 NT5DC4Q86YG4 428 aa7.49□□□□□ -1.21
APP-206ENST00000359726 NAT16Q8N8M0 369 aa7.49□□□□□ -1.21
APP-206ENST00000359726 AFG1LQ8WV93 481 aa7.49□□□□□ -1.21
APP-206ENST00000359726 FIG4Q92562 907 aa7.49□□□□□ -1.21
APP-206ENST00000359726 NXNL1Q96CM4 212 aa7.49□□□□□ -1.21
APP-206ENST00000359726 P2RY11Q96G91 374 aa7.49□□□□□ -1.21
APP-206ENST00000359726 CEP170P1Q96L14 293 aa7.49□□□□□ -1.21
APP-206ENST00000359726 ZNF560Q96MR9 790 aa7.49□□□□□ -1.21
APP-206ENST00000359726 MLPHQ9BV36 600 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 TRIM54Q9BYV2 358 aa7.49□□□□□ -1.21
APP-206ENST00000359726 TRIM8Q9BZR9 551 aa7.49□□□□□ -1.21
APP-206ENST00000359726 FAM49AQ9H0Q0 323 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 RHOJQ9H4E5 214 aa7.49□□□□□ -1.21
APP-206ENST00000359726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
APP-206ENST00000359726 SPON1Q9HCB6 807 aa7.49□□□□□ -1.21
APP-206ENST00000359726 PTPRHQ9HD43 1115 aa7.49□□□□□ -1.21
APP-206ENST00000359726 TMEFF2Q9UIK5 374 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 EP400Q96L91 3159 aa7.49□□□□□ -1.21
APP-206ENST00000359726 SOWAHBA6NEL2 793 aa7.49□□□□□ -1.21
APP-206ENST00000359726 CLDN24A6NM45 220 aa7.49□□□□□ -1.21
APP-206ENST00000359726 CTDSP2O14595 271 aa7.49□□□□□ -1.21
APP-206ENST00000359726 AP3D1O14617 1153 aa7.49□□□□□ -1.21
APP-206ENST00000359726 CAPN5O15484 640 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 MFSD11O43934 449 aa7.49□□□□□ -1.21
APP-206ENST00000359726 AP2A1O95782 977 aa7.49□□□□□ -1.21
APP-206ENST00000359726 AHSGP02765 367 aa7.49□□□□□ -1.21
APP-206ENST00000359726 FYNP06241 537 aa7.49□□□□□ -1.21
APP-206ENST00000359726 CCDC159P0C7I6 412 aa7.49□□□□□ -1.21
APP-206ENST00000359726 HOXD8P13378 290 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 IST1P53990 364 aa7.49□□□□□ -1.21
APP-206ENST00000359726 PRKCDQ05655 676 aa7.49□□□□□ -1.21
APP-206ENST00000359726 PTPN11Q06124 597 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 TARDBPQ13148 414 aaKnown RBP eCLIP7.49□□□□□ -1.21
APP-206ENST00000359726 ORC1Q13415 861 aa7.49□□□□□ -1.21
APP-206ENST00000359726 NKG7Q16617 165 aa7.49□□□□□ -1.21
APP-206ENST00000359726 ZCCHC8Q6NZY4 707 aaKnown RBP7.49□□□□□ -1.21
APP-206ENST00000359726 ABHD15Q6UXT9 468 aa7.49□□□□□ -1.21
APP-206ENST00000359726 IDO2Q6ZQW0 420 aa7.49□□□□□ -1.21
APP-206ENST00000359726 OR7A2PQ8NGA2 310 aa7.49□□□□□ -1.21
APP-206ENST00000359726 OR4M1Q8NGD0 313 aa7.49□□□□□ -1.21
APP-206ENST00000359726 OR52K1Q8NGK4 314 aa7.49□□□□□ -1.21
APP-206ENST00000359726 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.49□□□□□ -1.217e-7■■■■■ 60.2
APP-206ENST00000359726 SDR39U1Q9NRG7 319 aaPredicted RBP7.49□□□□□ -1.21
APP-206ENST00000359726 RUVBL2Q9Y230 463 aaKnown RBP7.49□□□□□ -1.21
APP-206ENST00000359726 A0A0J9YYE9 177 aa7.48□□□□□ -1.21
APP-206ENST00000359726 SAGE2PA6NJ88 616 aa7.48□□□□□ -1.21
APP-206ENST00000359726 UBXN8O00124 270 aa7.48□□□□□ -1.21
APP-206ENST00000359726 RIMBP2O15034 1052 aa7.48□□□□□ -1.21
APP-206ENST00000359726 POLR1CO15160 346 aaPredicted RBP7.48□□□□□ -1.21
APP-206ENST00000359726 TPST1O60507 370 aa7.48□□□□□ -1.21
APP-206ENST00000359726 KPNA6O60684 536 aa7.48□□□□□ -1.21
APP-206ENST00000359726 DEAF1O75398 565 aaPredicted RBP7.48□□□□□ -1.21
APP-206ENST00000359726 CNTN5O94779 1100 aa7.48□□□□□ -1.21
APP-206ENST00000359726 KRT6AP02538 564 aa7.48□□□□□ -1.21
APP-206ENST00000359726 KRT6BP04259 564 aa7.48□□□□□ -1.21
APP-206ENST00000359726 GSNP06396 782 aa7.48□□□□□ -1.21
APP-206ENST00000359726 HTR1EP28566 365 aa7.48□□□□□ -1.21
APP-206ENST00000359726 MAGEA11P43364 429 aa7.48□□□□□ -1.21
APP-206ENST00000359726 GLRBP48167 497 aa7.48□□□□□ -1.21
APP-206ENST00000359726 TKTL1P51854 596 aa7.48□□□□□ -1.21
APP-206ENST00000359726 ATXN1P54253 815 aaKnown RBP7.48□□□□□ -1.21
APP-206ENST00000359726 CDH8P55286 799 aa7.48□□□□□ -1.21
APP-206ENST00000359726 RPS6P62753 249 aaKnown RBP7.48□□□□□ -1.21
APP-206ENST00000359726 CAPRIN1Q14444 709 aaKnown RBP7.48□□□□□ -1.21
APP-206ENST00000359726 ZNF460Q14592 562 aa7.48□□□□□ -1.21
APP-206ENST00000359726 BLOC1S3Q6QNY0 202 aa7.48□□□□□ -1.21
APP-206ENST00000359726 CCBE1Q6UXH8 406 aaPredicted RBP7.48□□□□□ -1.21
APP-206ENST00000359726 SCARA5Q6ZMJ2 495 aa7.48□□□□□ -1.21
APP-206ENST00000359726 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
APP-206ENST00000359726 RPS27LQ71UM5 84 aaKnown RBP7.48□□□□□ -1.21
APP-206ENST00000359726 CUZD1Q86UP6 607 aa7.48□□□□□ -1.21
APP-206ENST00000359726 KCNMB4Q86W47 210 aa7.48□□□□□ -1.21
APP-206ENST00000359726 SPNS2Q8IVW8 549 aa7.48□□□□□ -1.21
APP-206ENST00000359726 PSD4Q8NDX1 1056 aa7.48□□□□□ -1.21
APP-206ENST00000359726 BEST2Q8NFU1 509 aa7.48□□□□□ -1.21
APP-206ENST00000359726 LPAR1Q92633 364 aa7.48□□□□□ -1.21
APP-206ENST00000359726 TMBIM1Q969X1 311 aa7.48□□□□□ -1.21
APP-206ENST00000359726 MAP6Q96JE9 813 aa7.48□□□□□ -1.21
APP-206ENST00000359726 HSFY1Q96LI6 401 aa7.48□□□□□ -1.21
APP-206ENST00000359726 DGCR6LQ9BY27 220 aa7.48□□□□□ -1.21
APP-206ENST00000359726 ZFP14Q9HCL3 533 aa7.48□□□□□ -1.21
APP-206ENST00000359726 ATP13A2Q9NQ11 1180 aa7.48□□□□□ -1.21
APP-206ENST00000359726 GGA3Q9NZ52 723 aa7.48□□□□□ -1.21
APP-206ENST00000359726 TXNDC16Q9P2K2 825 aa7.48□□□□□ -1.21
APP-206ENST00000359726 NDUFAF1Q9Y375 327 aa7.48□□□□□ -1.21
APP-206ENST00000359726 NME7Q9Y5B8 376 aa7.48□□□□□ -1.21
APP-206ENST00000359726 PCDHA10Q9Y5I2 948 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms