RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 PPP1R12AO14974 1030 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 EIF3HO15372 352 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 DAPK3O43293 454 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 TNFSF14O43557 240 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 OPA1O60313 960 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 NDUFS2O75306 463 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 GRAP2O75791 330 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 STK10O94804 968 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 OLFM2O95897 454 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 NUDT17P0C025 328 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 ZDHHC11BP0C7U3 371 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 NCAM1P13591 858 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 RARGP13631 454 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 TSHRP16473 764 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CYP2F1P24903 491 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 IVDP26440 423 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 NTSR1P30989 418 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CCR1P32246 355 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 ACTN2P35609 894 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 GJC1P36383 396 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CTSKP43235 329 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 MAGEA6P43360 314 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CARSP49589 748 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CACNA2D1P54289 1103 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 SLC7A9P82251 487 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 SLC7A5Q01650 507 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 OTUD4Q01804 1114 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 SRSF1Q07955 248 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 DPYSQ14117 519 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 PAFAH1B3Q15102 231 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CDO1Q16878 200 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 KCNT1Q5JUK3 1230 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 BSPRYQ5W0U4 402 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 BTBD8Q5XKL5 378 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 AADACL2Q6P093 401 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 GALNT18Q6P9A2 607 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 RHBDF2Q6PJF5 856 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 DHRS13Q6UX07 377 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 PPP1R21Q6ZMI0 780 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 RFX8Q6ZV50 586 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 TRMT10CQ7L0Y3 403 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 GPRIN1Q7Z2K8 1008 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 TMPRSS12Q86WS5 348 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 MIB1Q86YT6 1006 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 RFX6Q8HWS3 928 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 ADGRG2Q8IZP9 1017 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 LZTR1Q8N653 840 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 PQLC3Q8N755 202 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 PLD5Q8N7P1 536 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 TERB1Q8NA31 727 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 DQX1Q8TE96 717 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CLEC4CQ8WTT0 213 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 RNF139Q8WU17 664 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 C1orf54Q8WWF1 131 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 DNASE2BQ8WZ79 361 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 HSPH1Q92598 858 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 FATE1Q969F0 183 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 DACT3Q96B18 629 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 C1orf74Q96LT6 269 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 CCDC114Q96M63 670 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 TTC25Q96NG3 672 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 QKIQ96PU8 341 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 VAT1Q99536 393 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 HERPUD2Q9BSE4 406 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 HEMGNQ9BXL5 484 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 TLR8Q9NR97 1041 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 DDIT4Q9NX09 232 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 ERVK13-1Q9NX77 482 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 KLHL14Q9P2G3 628 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 ASIC3Q9UHC3 531 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 PCSK1NQ9UHG2 260 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 HPCAL4Q9UM19 191 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 ZNF148Q9UQR1 794 aa7.05□□□□□ -1.28
VPS13A-201ENST00000355766 R3HDM2Q9Y2K5 976 aaKnown RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 COL5A1P20908 1838 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-201ENST00000355766 HELZP42694 1942 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 DENND4CQ5VZ89 1909 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ESYT3A0FGR9 886 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TBC1D3BA6NDS4 549 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 PYCARD-AS1I3L0S3 204 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TNFRSF10CO14798 259 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 SCAMP3O14828 347 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 HOXC11O43248 304 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ZNF205O95201 554 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 LATS1O95835 1130 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 IGLV3-27P01718 113 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ABHD2P08910 425 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 MYBL2P10244 700 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 RBP3P10745 1247 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 KRT10P13645 584 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 YWHAQP27348 245 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 CD6P30203 668 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 HNF1BP35680 557 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 ADCY8P40145 1251 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 WASP42768 502 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 GRK6P43250 576 aa7.04□□□□□ -1.28
VPS13A-201ENST00000355766 TNNT3P45378 269 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 RPL21P46778 160 aaKnown RBP7.04□□□□□ -1.28
VPS13A-201ENST00000355766 EIF3EP60228 445 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms