RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 PCED1BQ96HM7 432 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF419Q96HQ0 510 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 SENP8Q96LD8 212 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 PPP1R10Q96QC0 940 aaKnown RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 OSMRQ99650 979 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 KATNBL1Q9H079 304 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 IL1RL2Q9HB29 575 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 GOLGA2P5Q9HBQ8 144 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 ZFYVE28Q9HCC9 887 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 AIG1Q9NVV5 245 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 POLR3BQ9NW08 1133 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 KPNA4O00629 521 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 ENO2P09104 434 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 CDH1P12830 882 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 HGFP14210 728 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 CD247P20963 164 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 CHRNA4P43681 627 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 CDKN2DP55273 166 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 GSTM4Q03013 218 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 EMX2Q04743 252 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 BNIP3Q12983 259 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 TOP3AQ13472 1001 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 GRB7Q14451 532 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 SKIV2LQ15477 1246 aaKnown RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 GTF2IRD2BQ6EKJ0 949 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 TAF2Q6P1X5 1199 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 GTF2IRD2Q86UP8 949 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 AADATQ8N5Z0 425 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 PTGR2Q8N8N7 351 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 SNX31Q8N9S9 440 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 MAGEE2Q8TD90 523 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 EDEM1Q92611 657 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 HDAC2Q92769 488 aaKnown RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 BIRC7Q96CA5 298 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 TUBGCP3Q96CW5 907 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 AURKBQ96GD4 344 aaPredicted RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 SLC30A3Q99726 388 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 BRINP2Q9C0B6 783 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 HPS4Q9NQG7 708 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 ZIM2Q9NZV7 527 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 POLG2Q9UHN1 485 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 MAGEL2Q9UJ55 1249 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 RIMKLBQ9ULI2 386 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 PIN4Q9Y237 131 aaKnown RBP11.38□□□□□ -0.59
CAPN9-202ENST00000354537 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
CAPN9-202ENST00000354537 CCDC162PA2VCL2 907 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 DYNC1LI2O43237 492 aaPredicted RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 TPST1O60507 370 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 FUCA1P04066 466 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 CDH3P22223 829 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 RENBPP51606 427 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 TRAF2Q12933 501 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 LCP2Q13094 533 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 CAPRIN1Q14444 709 aaKnown RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 NR1D2Q14995 579 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 DUSP28Q4G0W2 176 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 TTC23Q5W5X9 447 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF772Q68DY9 489 aaPredicted RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 TFAP2DQ7Z6R9 452 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 TMEM199Q8N511 208 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 PTERQ96BW5 349 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 NEURL2Q9BR09 285 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 C1QTNF3Q9BXJ4 246 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 FAM49AQ9H0Q0 323 aaPredicted RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 SELENONQ9NZV5 590 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 IPPQ9Y573 584 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 PCDHB3Q9Y5E6 796 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 MYBPHLA2RUH7 354 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 H0Y858 1186 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 K7EPI3 171 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 IFRD1O00458 451 aaPredicted RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 IRAK2O43187 625 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 DEAF1O75398 565 aaPredicted RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 KATNA1O75449 491 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 SNAP29O95721 258 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 CYBBP04839 570 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 MATN1P21941 496 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 PCSK1P29120 753 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 DAG1Q14118 895 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 ZNF846Q147U1 533 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 ARTNQ5T4W7 220 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 NEK10Q6ZWH5 1172 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 THAP5Q7Z6K1 395 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 OFCC1Q8IZS5 231 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 DPP10Q8N608 796 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 RTL3Q8N8U3 475 aaKnown RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 SMG8Q8ND04 991 aaKnown RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 SNX19Q92543 992 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 GLT1D1Q96MS3 346 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 CHID1Q9BWS9 393 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 NAA50Q9GZZ1 169 aaKnown RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 TUBB1Q9H4B7 451 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 TLR9Q9NR96 1032 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 RGS18Q9NS28 235 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
CAPN9-202ENST00000354537 GINS2Q9Y248 185 aa11.37□□□□□ -0.59
CAPN9-202ENST00000354537 MCM3APO60318 1980 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms