RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 POLD2P49005 469 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 GSDMDP57764 484 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 SPIDRQ14159 915 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 NOMO1Q15155 1222 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 C14orf28Q4W4Y0 310 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 FAM182AQ5T1J6 154 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 HENMT1Q5T8I9 393 aaKnown RBP15.98■□□□□ 0.15
ATG4B-201ENST00000344376 TRIM74Q86UV6 250 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 GALNT13Q8IUC8 556 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 CDKL3Q8IVW4 592 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-201ENST00000344376 GPR156Q8NFN8 814 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 CCL4L1Q8NHW4 92 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 OR2M4Q96R27 311 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 AGAP2Q99490 1192 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 DESI2Q9BSY9 194 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 UBP1Q9NZI7 540 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 SHOC2Q9UQ13 582 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 RAXQ9Y2V3 346 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 ZNF711Q9Y462 761 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 GPSM3Q9Y4H4 160 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 PCDHB1Q9Y5F3 818 aa15.98■□□□□ 0.15
ATG4B-201ENST00000344376 MIF4GDA9UHW6 222 aaKnown RBP15.97■□□□□ 0.15
ATG4B-201ENST00000344376 USP12O75317 370 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 ZNF189O75820 626 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-201ENST00000344376 STK10O94804 968 aaKnown RBP15.97■□□□□ 0.15
ATG4B-201ENST00000344376 TJP3O95049 919 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 PIRTP0C851 137 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 CD68P34810 354 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-201ENST00000344376 ISXQ2M1V0 245 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 ITPRIPL1Q6GPH6 555 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 OGFOD3Q6PK18 319 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 ZNF567Q8N184 647 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 ACTL9Q8TC94 416 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 SCARF2Q96GP6 870 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-201ENST00000344376 COX14Q96I36 57 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 FCRL5Q96RD9 977 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 VPS18Q9P253 973 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 RSPH14Q9UHP6 348 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 TMEM98Q9Y2Y6 226 aa15.97■□□□□ 0.15
ATG4B-201ENST00000344376 GOLGA6L9A6NEM1 432 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 NOBOXO60393 691 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 GLB1P16278 677 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 ACTN2P35609 894 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 ADCY8P40145 1251 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 WNT3AP56704 352 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 DCDC1P59894 354 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 OTUD4Q01804 1114 aaKnown RBP15.96■□□□□ 0.15
ATG4B-201ENST00000344376 MPP3Q13368 585 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 BIRC2Q13490 618 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 LRP8Q14114 963 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 ZNF569Q5MCW4 686 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 CERCAMQ5T4B2 595 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 SLC30A9Q6PML9 568 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 MARK2Q7KZI7 788 aaKnown RBP15.96■□□□□ 0.15
ATG4B-201ENST00000344376 ZDHHC1Q8WTX9 485 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 GFM1Q96RP9 751 aaKnown RBP15.96■□□□□ 0.15
ATG4B-201ENST00000344376 ZSCAN5AQ9BUG6 496 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 SPATA16Q9BXB7 569 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 FSD1LQ9BXM9 530 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 TAAR2Q9P1P5 351 aa15.96■□□□□ 0.15
ATG4B-201ENST00000344376 ZW10O43264 779 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 BRINP1O60477 761 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 EPOP01588 193 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 FUCA1P04066 466 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 PNLIPP16233 465 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 RBL1P28749 1068 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 ACTR1BP42025 376 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 EIF3EP60228 445 aaKnown RBP15.96■□□□□ 0.14
ATG4B-201ENST00000344376 ACTR1AP61163 376 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 GABREP78334 506 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 CTBSQ01459 385 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 HLTFQ14527 1009 aaKnown RBP eCLIP15.96■□□□□ 0.14
ATG4B-201ENST00000344376 ALS2CLQ60I27 953 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 PDPK2PQ6A1A2 396 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 KDELC1Q6UW63 502 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 TMC3Q7Z5M5 1100 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 NRROSQ86YC3 692 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 CCNJLQ8IV13 435 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 LSMEM2Q8N112 164 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 PTCD2Q8WV60 388 aaKnown RBP15.96■□□□□ 0.14
ATG4B-201ENST00000344376 ALG3Q92685 438 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 WDR24Q96S15 920 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 TSGA10Q9BZW7 698 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 TRABDQ9H4I3 376 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 RMI1Q9H9A7 625 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 SPATS2LQ9NUQ6 558 aaKnown RBP15.96■□□□□ 0.14
ATG4B-201ENST00000344376 NFKBIL1Q9UBC1 381 aaPredicted RBP15.96■□□□□ 0.14
ATG4B-201ENST00000344376 APPL1Q9UKG1 709 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 FREM2Q5SZK8 3169 aa15.96■□□□□ 0.14
ATG4B-201ENST00000344376 KNTC1P50748 2209 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 LOC285095A0A1B0GVY8 99 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 FADS2P1A8MWK0 482 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 F5H423 210 aaPredicted RBP15.95■□□□□ 0.14
ATG4B-201ENST00000344376 TMX2-CTNND1H3BSU7 103 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 NUDT21O43809 227 aaKnown RBP15.95■□□□□ 0.14
ATG4B-201ENST00000344376 RPLP0P05388 317 aaKnown RBP15.95■□□□□ 0.14
ATG4B-201ENST00000344376 RBP3P10745 1247 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 PYGMP11217 842 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 HLA-DPA1P20036 260 aa15.95■□□□□ 0.14
ATG4B-201ENST00000344376 AK4P27144 223 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms