RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 REXO5Q96IC2 774 aaKnown RBP12.77□□□□□ -0.36
LIN54-201ENST00000340417 RAB11FIP5Q9BXF6 653 aa12.77□□□□□ -0.36
LIN54-201ENST00000340417 TMEM189-UBE2V1I3L0A0 370 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 AP2A1O95782 977 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 ZNF30P17039 623 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 NSG1P42857 185 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 STX5Q13190 355 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 NFYCQ13952 458 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 LRRC8BQ6P9F7 803 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 MAPK15Q8TD08 544 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 ING2Q9H160 280 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 KRT87PA6NCN2 255 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 PEX12O00623 359 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 CDKN2BP42772 138 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
LIN54-201ENST00000340417 DPYSL2Q16555 572 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 TCAIMQ8N3R3 496 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 ATAD3AQ9NVI7 634 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 TBX21Q9UL17 535 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 J3KR12 359 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 TULP3O75386 442 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 LEFTY1O75610 366 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 ZNF8P17098 575 aaPredicted RBP12.77□□□□□ -0.37
LIN54-201ENST00000340417 HNRNPH3P31942 346 aaKnown RBP12.77□□□□□ -0.37
LIN54-201ENST00000340417 ALG11Q2TAA5 492 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 ALKBH2Q6NS38 261 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 TTC9BQ8N6N2 239 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 RAD51AP1Q96B01 352 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 RTP3Q9BQQ7 232 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 VRTNQ9H8Y1 702 aa12.77□□□□□ -0.37
LIN54-201ENST00000340417 UBXN8O00124 270 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 PAK4O96013 591 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 SERPINB4P48594 390 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TAS2R50P59544 299 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 RING1Q06587 406 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 IRF2BPLQ9H1B7 796 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 RSPH9Q9H1X1 276 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 USP54Q70EL1 1684 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 LOC100653049A0A140TA62 436 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SERPINI2O75830 405 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 KRT34O76011 436 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SLC10A7Q0GE19 358 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 NAE1Q13564 534 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 ZNF805Q5CZA5 627 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TMEM25Q86YD3 366 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TRPC4APQ8TEL6 797 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SLC22A18Q96BI1 424 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SEMA4AQ9H3S1 761 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 LATS1O95835 1130 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 UNGP13051 313 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 PDE1CQ14123 709 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 CST6Q15828 149 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 OLFML1Q6UWY5 402 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 OR2T3Q8NH03 318 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 RHBDD1Q8TEB9 315 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SHISA4Q96DD7 197 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 PHF7Q9BWX1 381 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 LRRC19Q9H756 370 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TMEM248Q9NWD8 314 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 V9GYQ6 96 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TTC24A2A3L6 582 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 CCL22O00626 93 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 FSCN2O14926 492 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 CNTN5O94779 1100 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 MLYCDO95822 493 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 STK19P49842 368 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 ELAVL3Q14576 367 aaKnown RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 TMC3Q7Z5M5 1100 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 ZCCHC10Q8TBK6 192 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 RC3H2Q9HBD1 1191 aaKnown RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 PRKAG3Q9UGI9 489 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 GPR34Q9UPC5 381 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 COQ6Q9Y2Z9 468 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TCAF1Q9Y4C2 921 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 NPEPPSL1A6NEC2 478 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 GOT2P00505 430 aaKnown RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 TCN1P20061 433 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 DPP6P42658 865 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SLC16A1P53985 500 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TXNDC11Q6PKC3 985 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SNX20Q7Z614 316 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 GJD3Q8N144 294 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SORCS1Q8WY21 1168 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 NXPE3Q969Y0 559 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 DACT3Q96B18 629 aaPredicted RBP12.76□□□□□ -0.37
LIN54-201ENST00000340417 SH3GL1Q99961 368 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 SGK2Q9HBY8 427 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 ALKBH4Q9NXW9 302 aa12.76□□□□□ -0.37
LIN54-201ENST00000340417 TTC34A8MYJ7 566 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 KHNYNO15037 678 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 RIPK2O43353 540 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 TSPAN6O43657 245 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 SERPINB5P36952 375 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CCNFP41002 786 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 MASP1P48740 699 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms