RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 COL6A1P12109 1028 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 NCF1P14598 390 aaPredicted RBP17.64■□□□□ 0.41
LRCH3-201ENST00000334859 RHDQ02161 417 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 SMARCB1Q12824 385 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 LCP2Q13094 533 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 ANKS3Q6ZW76 656 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 MIER2Q8N344 545 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 KIAA1191Q96A73 305 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 CDK5RAP1Q96SZ6 601 aaKnown RBP17.64■□□□□ 0.41
LRCH3-201ENST00000334859 GPR21Q99679 349 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 TRIM4Q9C037 500 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 DERL2Q9GZP9 239 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 TMEM181Q9P2C4 612 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 APPL1Q9UKG1 709 aa17.64■□□□□ 0.41
LRCH3-201ENST00000334859 NPEPPSL1A6NEC2 478 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 ENPP3O14638 875 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 ECI2O75521 394 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 FGF4P08620 206 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 SELPP16109 830 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 HSPA13P48723 471 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 CLCQ05315 142 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 TAF1AQ15573 450 aaPredicted RBP17.63■□□□□ 0.41
LRCH3-201ENST00000334859 PTPRNQ16849 979 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 CNPY1Q3B7I2 92 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 C6orf10Q5SRN2 563 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 HACD2Q6Y1H2 254 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 RETREG3Q86VR2 466 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 GALNT15Q8N3T1 639 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 EFHBQ8N7U6 833 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 MDGA1Q8NFP4 955 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 LRTOMTQ8WZ04 291 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 TDRD1Q9BXT4 1180 aaKnown RBP17.63■□□□□ 0.41
LRCH3-201ENST00000334859 IKZF3Q9UKT9 509 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 AGO1Q9UL18 857 aaKnown RBP17.63■□□□□ 0.41
LRCH3-201ENST00000334859 PCDHGB4Q9UN71 923 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 MED16Q9Y2X0 877 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 PCDHGB5Q9Y5G0 923 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 SNX13Q9Y5W8 968 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 H3BNC9 293 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 BTN3A1O00481 513 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 ANGPT2O15123 496 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 ADAM12O43184 909 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 KDELR3O43731 214 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 TBC1D4O60343 1298 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 NBNO60934 754 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 IRF1P10914 325 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 RPL17P18621 184 aaKnown RBP17.63■□□□□ 0.41
LRCH3-201ENST00000334859 GSTT1P30711 240 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 CDKN1CP49918 316 aaPredicted RBP17.63■□□□□ 0.41
LRCH3-201ENST00000334859 SGSHP51688 502 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 CDKL1Q00532 357 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 ELAVL2Q12926 359 aaKnown RBP17.63■□□□□ 0.41
LRCH3-201ENST00000334859 TRAP1Q12931 704 aaKnown RBP17.63■□□□□ 0.41
LRCH3-201ENST00000334859 GK3PQ14409 553 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 RPS6KA2Q15349 733 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 NRF1Q16656 503 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 C5orf22Q49AR2 442 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 VPS26BQ4G0F5 336 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 RIN3Q8TB24 985 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 PBXIP1Q96AQ6 731 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 ROPN1LQ96C74 230 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 CD300AQ9UGN4 299 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 POLG2Q9UHN1 485 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 PCDHGC4Q9Y5F7 938 aa17.63■□□□□ 0.41
LRCH3-201ENST00000334859 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.62■□□□□ 0.41
LRCH3-201ENST00000334859 A0A1B0GTL3 188 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 LCHNA4D1U4 455 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 BBIP1A8MTZ0 92 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 CDC7O00311 574 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 AP1G1O43747 822 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 CLDN11O75508 207 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 HGFP14210 728 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 SP3Q02447 781 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 ZNF177Q13360 481 aaPredicted RBP17.62■□□□□ 0.41
LRCH3-201ENST00000334859 SATL1Q86VE3 508 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 DHFR2Q86XF0 187 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 C2orf15Q8WU43 125 aaKnown RBP17.62■□□□□ 0.41
LRCH3-201ENST00000334859 ZBED2Q9BTP6 218 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 TTLL2Q9BWV7 592 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 MUC3BQ9H195 1237 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 TUBB1Q9H4B7 451 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 ELAC1Q9H777 363 aaKnown RBP17.62■□□□□ 0.41
LRCH3-201ENST00000334859 GMPR2Q9P2T1 348 aaKnown RBP17.62■□□□□ 0.41
LRCH3-201ENST00000334859 TBC1D30Q9Y2I9 924 aa17.62■□□□□ 0.41
LRCH3-201ENST00000334859 SYCE1LA8MT33 242 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 TSPAN3O60637 253 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 ALDH1A1P00352 501 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 SMIM18P0DKX4 95 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 HSPA8P11142 646 aaKnown RBP17.61■□□□□ 0.41
LRCH3-201ENST00000334859 CORO1AP31146 461 aaKnown RBP17.61■□□□□ 0.41
LRCH3-201ENST00000334859 ATP6V0D1P61421 351 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 SETMARQ53H47 684 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-201ENST00000334859 C8orf82Q6P1X6 216 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-201ENST00000334859 HERC6Q8IVU3 1022 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 FBXO22Q8NEZ5 403 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 BCL7CQ8WUZ0 217 aaPredicted RBP17.61■□□□□ 0.41
LRCH3-201ENST00000334859 PPWD1Q96BP3 646 aaKnown RBP17.61■□□□□ 0.41
LRCH3-201ENST00000334859 FKBPLQ9UIM3 349 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 RAI2Q9Y5P3 530 aa17.61■□□□□ 0.41
LRCH3-201ENST00000334859 TBKBP1A7MCY6 615 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms