RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 FAM50BQ9Y247 325 aa12.86□□□□□ -0.35
CPSF6-201ENST00000266679 H3BNC9 293 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 SRP72O76094 671 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CDK14O94921 469 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CRTAMO95727 393 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 RHOCP08134 193 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 ALDOCP09972 364 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 HOXB8P17481 243 aaPredicted RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CDH4P55283 916 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CCL23P55773 120 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 STX1BP61266 288 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 FOLH1Q04609 750 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 KIF19Q2TAC6 998 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 C5orf22Q49AR2 442 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 AFTPHQ6ULP2 937 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 NPAS4Q8IUM7 802 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 LILRA2Q8N149 483 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 FBXO22Q8NEZ5 403 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 DLG3Q92796 817 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 KCNA7Q96RP8 456 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 TTLL2Q9BWV7 592 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PCDHAC1Q9H158 963 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PIDD1Q9HB75 910 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 POPDC3Q9HBV1 291 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 FNDC3AQ9Y2H6 1198 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PRSS51A0A1B0GVH4 220 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 ENO4A6NNW6 628 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PIP5K1BO14986 540 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 INSIG1O15503 277 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 KDELR3O43731 214 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CORO1AP31146 461 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CDKN1CP49918 316 aaPredicted RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 FOXA1P55317 472 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 SMARCB1Q12824 385 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PDK3Q15120 406 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 FBXO48Q5FWF7 155 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PAQR3Q6TCH7 311 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 DDIASQ8IXT1 998 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CLYBLQ8N0X4 340 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 MDGA1Q8NFP4 955 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 TRPC4APQ8TEL6 797 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 C2orf15Q8WU43 125 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 TWIST2Q8WVJ9 160 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 PSKH2Q96QS6 385 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 ATOH8Q96SQ7 321 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 TSC22D3Q99576 134 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 CCDC68Q9H2F9 335 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 AKTIPQ9H8T0 292 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 MRGBPQ9NV56 204 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 INTS10Q9NVR2 710 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 SUCOQ9UBS9 1254 aaKnown RBP12.85□□□□□ -0.35
CPSF6-201ENST00000266679 RIMKLBQ9ULI2 386 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 TANC1Q9C0D5 1861 aa12.85□□□□□ -0.35
CPSF6-201ENST00000266679 TRANK1O15050 2925 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 NPEPPSL1A6NEC2 478 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 GRXCR1A8MXD5 290 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 CBX4O00257 560 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 NR5A2O00482 541 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 AZIN1O14977 448 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 COCHO43405 550 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 NDUFS3O75489 264 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 MTHFD2P13995 350 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 EEF1DP29692 281 aaKnown RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 MTA1Q13330 715 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 UGT3A2Q3SY77 523 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 ST13P4Q8IZP2 240 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 EFHBQ8N7U6 833 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 LPGAT1Q92604 370 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 ASB9Q96DX5 294 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 SCLYQ96I15 445 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 TRAPPC9Q96Q05 1148 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 BTBD9Q96Q07 612 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 CDK5RAP1Q96SZ6 601 aaKnown RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 TFB2MQ9H5Q4 396 aaKnown RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 AGO1Q9UL18 857 aaKnown RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 BTRCQ9Y297 605 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 TRIM24O15164 1050 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 NRP2O60462 931 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 KLKB1P03952 638 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 ATP4BP51164 291 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 ILF2Q12905 390 aaKnown RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 BTG3Q14201 252 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 GRB7Q14451 532 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 PTPRRQ15256 657 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 CYTH1Q15438 398 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 TAF1AQ15573 450 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 TSNQ15631 228 aaKnown RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 SETMARQ53H47 684 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 HECTD3Q5T447 861 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms