RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 HDAC11Q96DB2 347 aa18.91■□□□□ 0.62
TM6SF1-201ENST00000258909 OR2M4Q96R27 311 aa18.91■□□□□ 0.62
TM6SF1-201ENST00000258909 NUDT22Q9BRQ3 303 aa18.91■□□□□ 0.62
TM6SF1-201ENST00000258909 CEP41Q9BYV8 373 aa18.91■□□□□ 0.62
TM6SF1-201ENST00000258909 AMACRQ9UHK6 382 aa18.91■□□□□ 0.62
TM6SF1-201ENST00000258909 PCDHGA7Q9Y5G6 932 aa18.91■□□□□ 0.62
TM6SF1-201ENST00000258909 HEY1Q9Y5J3 304 aa18.91■□□□□ 0.62
TM6SF1-201ENST00000258909 TRBV23OR9-2A0A075B6M9 112 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ERVH48-1M5A8F1 160 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ASMTLO95671 621 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 MMP2P08253 660 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 MAN1A1P33908 653 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 MAPK10P53779 464 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 RHDQ02161 417 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ZBTB17Q13105 803 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 SRSF6Q13247 344 aaKnown RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 C16orf72Q14CZ0 275 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 NKAIN2Q5VXU1 208 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ZNF574Q6ZN55 896 aaPredicted RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 B4GALNT4Q76KP1 1039 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ZNF438Q7Z4V0 828 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PIM3Q86V86 326 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PLD5Q8N7P1 536 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 SCARF2Q96GP6 870 aaPredicted RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 CDH19Q9H159 772 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ZNHIT6Q9NWK9 470 aaKnown RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PRKAB1Q9Y478 270 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PCYT1BQ9Y5K3 369 aaPredicted RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PRAMEF33A0A0G2JMD5 474 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 C1orf232A0A0U1RR37 186 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 K7ENP7 123 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PPM1DO15297 605 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 EFSO43281 561 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PRAMEF10O60809 474 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 CPNE6O95741 557 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ATP1A1P05023 1023 aaKnown RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 CA4P22748 312 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 CFHR1Q03591 330 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 QPCTQ16769 361 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 PYCR3Q53H96 274 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 INO80CQ6PI98 192 aaPredicted RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ZNF765Q7L2R6 523 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 ZNF843Q8N446 348 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 CNTD1Q8N815 330 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 RCBTB1Q8NDN9 531 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 EXD1Q8NHP7 514 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 USP7Q93009 1102 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 WDR24Q96S15 920 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 CMKLR1Q99788 373 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 HAUS2Q9NVX0 235 aa18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 OAS3Q9Y6K5 1087 aaKnown RBP18.9■□□□□ 0.62
TM6SF1-201ENST00000258909 SSU72P8A0A1W2PR75 194 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 CBFA2T2O43439 604 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 TNNT1P13805 278 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 MPSTP25325 297 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 CD1CP29017 333 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 AP1B1Q10567 949 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 TRIM14Q14142 442 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 LY6DQ14210 128 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 GALNT3Q14435 633 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 NPNTQ6UXI9 565 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 KDELC2Q7Z4H8 507 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 NLRP8Q86W28 1048 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 ZFAND4Q86XD8 727 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 ZNF761Q86XN6 746 aaPredicted RBP18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 GALNT13Q8IUC8 556 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 NRSN1Q8IZ57 195 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 SNRNP27Q8WVK2 155 aaKnown RBP18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 COX14Q96I36 57 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 ZNF830Q96NB3 372 aaPredicted RBP18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 CCNL2Q96S94 520 aaPredicted RBP18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 SEMA4CQ9C0C4 833 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 ABHD10Q9NUJ1 306 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 FOXJ2Q9P0K8 574 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 ZNHIT2Q9UHR6 403 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 LCMT1Q9UIC8 334 aa18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 CNOT6Q9ULM6 557 aaKnown RBP18.89■□□□□ 0.61
TM6SF1-201ENST00000258909 C3orf70A6NLC5 250 aaPredicted RBP18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 ANKRD66B4E2M5 251 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 EML2O95834 649 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 CCL4P13236 92 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 RPL26P61254 145 aaKnown RBP18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 PPIDQ08752 370 aaKnown RBP18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 NR1D2Q14995 579 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 VSTM4Q8IW00 320 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 TTC9Q92623 222 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 MLPHQ9BV36 600 aaPredicted RBP18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 NHEJ1Q9H9Q4 299 aaPredicted RBP18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 SEPT10Q9P0V9 454 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 DNPEPQ9ULA0 475 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 RPL26L1Q9UNX3 145 aaKnown RBP18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 HYOU1Q9Y4L1 999 aa18.88■□□□□ 0.61
TM6SF1-201ENST00000258909 IGHV5-10-1A0A0J9YXX1 117 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 FADS2P1A8MWK0 482 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 NVLO15381 856 aaKnown RBP18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 PYGLP06737 847 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 SPINT3P49223 89 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 DYNLT1P63172 113 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 IFI35P80217 286 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms