RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RANBP10Q6VN20 620 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 CYHR1Q6ZMK1 362 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 CHST15Q7LFX5 561 aaPredicted RBP18.9■□□□□ 0.62
SNX4-201ENST00000251775 ZC3H7AQ8IWR0 971 aaKnown RBP18.9■□□□□ 0.62
SNX4-201ENST00000251775 RTL3Q8N8U3 475 aaKnown RBP18.9■□□□□ 0.62
SNX4-201ENST00000251775 ROPN1LQ96C74 230 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 CENPNQ96H22 339 aaPredicted RBP18.9■□□□□ 0.62
SNX4-201ENST00000251775 ARHGAP39Q9C0H5 1083 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 SPC25Q9HBM1 224 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 ENTPD7Q9NQZ7 604 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 TREX1Q9NSU2 369 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 TMEM9Q9P0T7 183 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 EGFL7Q9UHF1 273 aa18.9■□□□□ 0.62
SNX4-201ENST00000251775 DOCK4Q8N1I0 1966 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 ADAMTS4O75173 837 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 HOXD12P35452 270 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 TRAF2Q12933 501 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 NR1D2Q14995 579 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 CCDC117Q8IWD4 279 aaPredicted RBP18.89■□□□□ 0.61
SNX4-201ENST00000251775 TRUB1Q8WWH5 349 aaKnown RBP18.89■□□□□ 0.61
SNX4-201ENST00000251775 ITPKCQ96DU7 683 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 UROC1Q96N76 676 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 YIPF2Q9BWQ6 316 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 FSD1LQ9BXM9 530 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 NOL6Q9H6R4 1146 aaKnown RBP18.89■□□□□ 0.61
SNX4-201ENST00000251775 ZFYVE28Q9HCC9 887 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 FBRSL1Q9HCM7 1045 aaKnown RBP18.89■□□□□ 0.61
SNX4-201ENST00000251775 ABCD2Q9UBJ2 740 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 TMEM247A6NEH6 219 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 EI24O14681 340 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 TYMPP19971 482 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 MATN1P21941 496 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 IL10P22301 178 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 YAP1P46937 504 aaKnown RBP18.89■□□□□ 0.61
SNX4-201ENST00000251775 MAPK10P53779 464 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 ATP6V0D1P61421 351 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 INPP5AQ14642 412 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 TIGD7Q6NT04 549 aaPredicted RBP18.89■□□□□ 0.61
SNX4-201ENST00000251775 AFAP1L2Q8N4X5 818 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 IL1RL2Q9HB29 575 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 MAP10Q9P2G4 905 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 SLC30A1Q9Y6M5 507 aa18.89■□□□□ 0.61
SNX4-201ENST00000251775 A8MT66 165 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 AURKAO14965 403 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 C7P10643 843 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 PSMA4P25789 261 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 POLR2IP36954 125 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 POLD2P49005 469 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 MLLT6P55198 1093 aaPredicted RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 SEPT6Q14141 434 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 KCNA10Q16322 511 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 PCSK7Q16549 785 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 SLC39A12Q504Y0 691 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 CYBRD1Q53TN4 286 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 PIK3R6Q5UE93 754 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 MFSD14CQ5VZR4 134 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 EGFLAMQ63HQ2 1017 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 LARP4Q71RC2 724 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNX4-201ENST00000251775 ZNF598Q86UK7 904 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 ADGRG5Q8IZF4 528 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 ELMO2Q96JJ3 720 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 FEM1CQ96JP0 617 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 SEZ6LQ9BYH1 1024 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 SOX17Q9H6I2 414 aaPredicted RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 EML4Q9HC35 981 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 MRM3Q9HC36 420 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 IGSF5Q9NSI5 407 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 ABI2Q9NYB9 513 aaPredicted RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 ERGIC3Q9Y282 383 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 ATP6AP2A0A1C7CYW4 349 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 HTR3EA5X5Y0 456 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 ATP6AP2O75787 350 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 CCNA2P20248 432 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 CAPGP40121 348 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 GPR15P49685 360 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 YBX1P67809 324 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 GNA12Q03113 381 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 TECRLQ5HYJ1 363 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 ZNF470Q6ECI4 717 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 LCN8Q6JVE9 175 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 ZNF280BQ86YH2 543 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 C2CD4AQ8NCU7 369 aaPredicted RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 OR13F1Q8NGS4 319 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 PTCD2Q8WV60 388 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 MYRFLQ96LU7 910 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 TUBA1CQ9BQE3 449 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 TDRD1Q9BXT4 1180 aaKnown RBP18.88■□□□□ 0.61
SNX4-201ENST00000251775 TRIM15Q9C019 465 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 TBC1D13Q9NVG8 400 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 PCDHB8Q9UN66 801 aa18.88■□□□□ 0.61
SNX4-201ENST00000251775 ESRRBO95718 433 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 CPNE6O95741 557 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 PEX11BO96011 259 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 ALDOCP09972 364 aaKnown RBP18.87■□□□□ 0.61
SNX4-201ENST00000251775 GPX3P22352 226 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 PLK1P53350 603 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 CYP2A13Q16696 494 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 RGS21Q2M5E4 152 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 SLC15A3Q8IY34 581 aa18.87■□□□□ 0.61
SNX4-201ENST00000251775 DHRSXQ8N5I4 330 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms