RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CRYL1Q9Y2S2 319 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 FIS1Q9Y3D6 152 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 AP4S1Q9Y587 144 aa22.14■■□□□ 1.13
CCDC9-201ENST00000221922 ZFP37Q9Y6Q3 630 aaPredicted RBP22.14■■□□□ 1.13
CCDC9-201ENST00000221922 A0A0D9SEW6 157 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 CCDC162PA2VCL2 907 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 H3BNC9 293 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 CLDN11O75508 207 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 GJB3O75712 270 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 SOD2P04179 222 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 SNRPB2P08579 225 aaKnown RBP22.13■■□□□ 1.13
CCDC9-201ENST00000221922 SUOXP51687 545 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 OXCT1P55809 520 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 TLE2Q04725 743 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 APOFQ13790 326 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 PPP1R3AQ16821 1122 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 C8orf82Q6P1X6 216 aaPredicted RBP22.13■■□□□ 1.13
CCDC9-201ENST00000221922 PAOXQ6QHF9 649 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 TMEM207Q6UWW9 146 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 HACD2Q6Y1H2 254 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 ISCA2Q86U28 154 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 METTL25Q8N6Q8 603 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 OR7D4Q8NG98 312 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 PHF21BQ96EK2 531 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 GSTO2Q9H4Y5 243 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 TRPM5Q9NZQ8 1165 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 PADI4Q9UM07 663 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 KDELR3O43731 214 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 TRMT2BQ96GJ1 504 aaKnown RBP22.13■■□□□ 1.13
CCDC9-201ENST00000221922 SLC25A23Q9BV35 468 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 RBM38Q9H0Z9 239 aaKnown RBP22.13■■□□□ 1.13
CCDC9-201ENST00000221922 SPAG4Q9NPE6 437 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 INTS10Q9NVR2 710 aaKnown RBP22.13■■□□□ 1.13
CCDC9-201ENST00000221922 PTTG2Q9NZH5 202 aa22.13■■□□□ 1.13
CCDC9-201ENST00000221922 ARIH1Q9Y4X5 557 aaPredicted RBP22.13■■□□□ 1.13
CCDC9-201ENST00000221922 ARSAP15289 507 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 ATP4BP51164 291 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 PLK1P53350 603 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 TYSND1Q2T9J0 566 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 TRIM60Q495X7 471 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 OR13C4Q8NGS5 318 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 RIN3Q8TB24 985 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 SPON2Q9BUD6 331 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 PCDHAC1Q9H158 963 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 ETAA1Q9NY74 926 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 CCDC167Q9P0B6 97 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 APPL1Q9UKG1 709 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 TRAF6Q9Y4K3 522 aa22.12■■□□□ 1.13
CCDC9-201ENST00000221922 TCRBV3S1A0A5B6 114 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 PRORSD1PA6NEY8 169 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 GPC4O75487 556 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 STC2O76061 302 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 SLC4A1P02730 911 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 CES1P23141 567 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 STC1P52823 247 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 NADK2Q4G0N4 442 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF549Q6P9A3 640 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 CYHR1Q6ZMK1 362 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 RBM44Q6ZP01 1051 aaKnown RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 RPS27LQ71UM5 84 aaKnown RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 PIM3Q86V86 326 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 DENND1CQ8IV53 801 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 SPNS2Q8IVW8 549 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 LPGAT1Q92604 370 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF597Q96LX8 424 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 ASB2Q96Q27 587 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 UHRF1Q96T88 793 aaPredicted RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 NLE1Q9NVX2 485 aaPredicted RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 TMEM181Q9P2C4 612 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 TBX21Q9UL17 535 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 YIPF1Q9Y548 306 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 ILVBLA1L0T0 632 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 UBFD1O14562 309 aaKnown RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 CD1DP15813 335 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 ACADVLP49748 655 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 MNX1P50219 401 aaPredicted RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 MAP7Q14244 749 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF678Q5SXM1 525 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 C1orf53Q5VUE5 145 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 LARP4Q71RC2 724 aaKnown RBP eCLIP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 CHST9Q7L1S5 443 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 PNPLA1Q8N8W4 532 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 EME1Q96AY2 570 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 SLCO4A1Q96BD0 722 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 NMD3Q96D46 503 aaKnown RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 CDKN2AIPNLQ96HQ2 116 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 AARSD1Q9BTE6 412 aaKnown RBP22.11■■□□□ 1.13
CCDC9-201ENST00000221922 LTBP2Q14767 1821 aa22.11■■□□□ 1.13
CCDC9-201ENST00000221922 GBF1Q92538 1859 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 INSIG1O15503 277 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 KLKB1P03952 638 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 RHOCP08134 193 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 HDCP19113 662 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 RPS24P62847 133 aaKnown RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 HERVK_113P63132 956 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 IRAK1BP1Q5VVH5 260 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 RAB44Q7Z6P3 723 aaPredicted RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 CHERPQ8IWX8 916 aaKnown RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 OR52K2Q8NGK3 314 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 RHEBL1Q8TAI7 183 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms