RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gtf2a2Q80ZM7 109 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cdkn3Q810P3 211 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Echs1Q8BH95 290 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc7a4Q8BLQ7 635 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pi4k2bQ8CBQ5 469 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Mterf1aQ8CHZ9 379 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Eva1bQ8K2Y3 164 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pcdhb11Q91UZ8 797 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Socs4Q91ZA6 436 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Traf7Q922B6 594 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 NgrnQ99KS2 293 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fam136aQ9CR98 138 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rnf181Q9CY62 165 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Snrnp48Q9D361 337 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nme7Q9QXL8 395 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Psma4Q9R1P0 261 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Psme4Q5SSW2 1843 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gbp4A4UUI3 631 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Bub1O08901 1058 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 NapsaO09043 419 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kifc3O35231 824 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 AprtP08030 180 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Mthfd2P18155 350 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 RxraP28700 467 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 UtyP79457 1212 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rasa4Q6PFQ7 802 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Trim17Q7TPM3 477 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dhx33Q80VY9 698 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tspan18Q80WR1 248 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Smoc1Q8BLY1 463 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zbtb33Q8BN78 671 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tigd4Q8BUZ3 513 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 H2-Q4Q8HWB2 354 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 PolbQ8K409 335 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ca9Q8VHB5 437 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 PrkxQ922R0 355 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dhrs7bQ99J47 323 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Glod4Q9CPV4 298 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Atp6v1g1Q9CR51 118 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rnf138rt1Q9D9M9 248 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gfra4Q9JJT2 260 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Keap1Q9Z2X8 624 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zfp626A0A0U1RQ84 676 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tnfrsf14A0A1W2P7D5 276 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lgr4A2ARI4 951 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pdia2D3Z6P0 527 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cdh18E9Q9Q6 790 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm10477F6SW83 55 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kpna6O35345 536 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nr5a2P45448 560 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Sipa1P46062 1037 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MtpnP62774 118 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lrrc74bQ14BP6 391 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Patl1Q3TC46 770 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 ChpfQ6IQX7 774 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Prpf18Q8BM39 342 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nup54Q8BTS4 510 aaKnown RBP9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slfn5Q8CBA2 884 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 N4bp2l2Q8JZS6 575 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ttc39cQ8VE09 580 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MiosQ8VE19 875 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Anxa13Q99JG3 317 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ifi44lQ9BDB7 447 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Oxct2bQ9ESL0 520 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Thap11Q9JJD0 305 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Oxct2aQ9JJN4 520 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gipc2Q9Z2H7 314 aa9.7□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tbkbp1A2A9T0 611 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Hk2O08528 917 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tap1P21958 724 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 S100a9P31725 113 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc22a23Q3UHH2 689 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pfdn4Q3UWL8 134 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 KdsrQ6GV12 332 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ephx4Q6IE26 359 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MroQ7TNB4 248 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pex26Q8BGI5 305 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cpne3Q8BT60 533 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Actr8Q8R2S9 624 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tmco1Q921L3 188 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nudt7Q99P30 236 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cdkn2aipnlQ9D211 116 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tchhl1Q9D3P1 638 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Il22Q9JJY9 179 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 CasrQ9QY96 1079 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fbxo17Q9QZM8 286 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 AadatQ9WVM8 425 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rps6kb2Q9Z1M4 485 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Nup205A0A0J9YUD5 2061 aaKnown RBP9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm15155B1B034 138 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Daw1D3Z7A5 415 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn2r96E9PZU5 664 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 A530032D15RikE9Q422 215 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Speer4cG3UXD1 256 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm10354K7N6A0 256 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm3248K7N721 186 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn2r5K7N788 911 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 LatO54957 242 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 P01641 117 aa9.69□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 AldoaP05064 364 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms