RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm3854A0A1B0GSS6 495 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Man1b1A2AJ15 658 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm14459A2BI73 179 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 A630010A05RikA9C473 232 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm13271B1AYH9 182 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Kcna10B2RQA1 511 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmem45a2B7ZWJ5 289 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn2r94E9PZK8 818 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pdzd7E9Q9W7 1021 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sod3O09164 251 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Klc1O88447 541 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Npr1P18293 1057 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gja4P28235 333 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sstr4P49660 385 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Krt6aP50446 553 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cntn5P68500 1098 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cyb5r2Q3KNK3 276 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cage1Q5IR70 849 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmcc1Q69ZZ6 649 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam126aQ6P9N1 521 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 SgtaQ8BJU0 315 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rmdn2Q8BSE0 410 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rspry1Q8BVR6 576 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr1208Q8VG47 308 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr45Q8VGM1 311 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rpp25Q91WE3 199 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ndc80Q9D0F1 642 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cacna2d3Q9Z1L5 1091 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gria4Q9Z2W8 902 aa8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Top3bQ9Z321 862 aaKnown RBP8.69□□□□□ -1.02
Trim39-201ENSMUST00000042717 Znf318Q99PP2 2237 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tsga10ipF7A1F0 157 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Aldh1a7O35945 501 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Top3aO70157 1003 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 AldoaP05064 364 aaKnown RBP8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 RxrbP28704 520 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Psen1P49769 467 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dsc3P55850 896 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 NcstnP57716 708 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tas2r16P59529 299 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Aup1P70295 410 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 G3bp2P97379 482 aaKnown RBP8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 HadhQ61425 314 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Jak2Q62120 1129 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cntn4Q69Z26 1026 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ddx51Q6P9R1 639 aaKnown RBP8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Phf8Q80TJ7 1023 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Susd6Q8BGE4 302 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 B3gnt5Q8BGY6 376 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mapk8Q91Y86 384 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Wdr6Q99ME2 1125 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pmf1Q9CPV5 202 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 ProzQ9CQW3 399 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fgfr1op2Q9CRA9 253 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ndufaf1Q9CWX2 328 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ssu72Q9CY97 194 aaKnown RBP8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tnfaip8l2Q9D8Y7 184 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pik3cgQ9JHG7 1102 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Habp4Q9JKS5 411 aaKnown RBP8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm2956E9PVJ0 216 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cyp2w1E9Q816 493 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Zfp846G3X996 541 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 MlxO08609 298 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Bub1O08901 1058 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Hs3st1O35310 311 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pde8aO88502 823 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cd8aP01731 247 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 UmpsP13439 481 aaKnown RBP8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 RxraP28700 467 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gdi1P50396 447 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Zbtb16Q3UQ17 673 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gpbp1l1Q6NZP2 473 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dennd2cQ6P9P8 914 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cabs1Q8C633 391 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Slc6a20aQ8VDB9 592 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Map3k21Q8VDG6 1002 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmem168Q91VX9 697 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tbrg4Q91YM4 630 aaKnown RBP8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Atad3Q925I1 591 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 HgsQ99LI8 775 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 AcadsbQ9DBL1 432 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dclk1Q9JLM8 756 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 RlfA2A7F4 1918 aa8.68□□□□□ -1.02
Trim39-201ENSMUST00000042717 Oas1eA0A0J9YV76 386 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Trim55G3X8Y1 545 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn2r21K7N6Y7 853 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn2r20L7N2B1 853 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gm3488M0QW81 238 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cd151O35566 253 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 DxoO70348 397 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Alas2P08680 587 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tgm2P21981 686 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Lingo4Q149C3 593 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Glt6d1Q2NKH9 311 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Caprin1Q60865 707 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Map3k10Q66L42 940 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Arhgef38Q80VK6 770 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmcc2Q80W04 706 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Itln1bQ80ZA0 313 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dtd2Q8BHA3 168 aa8.67□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms