RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Cyp2d34L7N463 504 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Lrrc55Q3UY51 311 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Serpinb9fQ80UK5 377 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Sra1Q80VJ2 232 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tecpr1Q80VP0 1166 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Kcng4Q80XM3 506 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mfsd8Q8BH31 519 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Olfr532Q8VGT4 309 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Serpinb9gQ8VHQ1 377 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dcp2Q9CYC6 422 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tbc1d25A1A5B6 742 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Sult6b2B7ZWN4 290 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mroh5E9PUJ8 762 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Q3U4G0 281 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Naf1Q3UMQ8 489 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Antxr2Q6DFX2 487 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Zfp606Q7TSV0 794 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Zfp101Q8BP18 612 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 RapsnP12672 412 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 BpgmP15327 259 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Pdx1P52946 284 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 E2f2P56931 443 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Brms1lQ3U1T3 323 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mpzl3Q3V3F6 237 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Leg1Q8C6C9 337 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dclre1cQ8K4J0 705 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Rtfdc1Q99K95 307 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dpysl5Q9EQF6 564 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mtmr9Q9Z2D0 545 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm45233A0A0N4SVE0 221 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 1700003F12RikA2AKE5 210 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Itm2bO89051 266 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 CatP24270 527 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 NfixP70257 488 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 SgcgP82348 291 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tgm3Q08189 693 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc39a9Q8BFU1 308 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Pabpc5Q8C7D3 381 aaKnown RBP16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mfsd14bQ8CIA9 507 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Themis3Q9CU24 569 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Il22Q9JJY9 179 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Calm4Q9JM83 148 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 C5P06684 1680 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm6509A0A0J9YUV1 481 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm5145F8VQ88 278 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm6351K9J7D1 481 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Polr2jO08740 117 aaKnown RBP16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Apba3O88888 571 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 BgnP28653 369 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mef2dQ63943 514 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Trnau1apQ80VC6 287 aaKnown RBP16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Olfr1487Q8VFQ6 315 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Marcksl1P28667 200 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 G2e3Q5RJY2 716 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Syt16Q7TN83 639 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Kcne2Q9D808 123 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ssxb6A2BI74 170 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Prdm15E9Q8T2 1174 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mup3P04939 184 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Entpd3Q8BFW6 529 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ankrd52Q8BTI7 1076 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 4930524N10RikQ9D519 233 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Scgb2b19J3QM75 112 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Epha3P29319 983 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ampd1Q3V1D3 745 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slitrk4Q810B8 837 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Znf436Q8BPP0 452 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 OgfrQ99PG2 633 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Scgb2b12S4R2L0 112 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Xlr4aA2BI40 215 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 E2f5Q61502 335 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Acsf2Q8VCW8 615 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Itm2cQ91VK4 269 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm13119B1ARV5 481 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm17555F6U8B9 371 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Hk3Q3TRM8 922 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Rbbp4Q60972 425 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Bloc1s5Q8R015 185 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Olfr700Q8VFM5 316 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Trps1Q925H1 1281 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 MycsQ9Z304 431 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ptpn3A2ALK8 913 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dhtkd1A2ATU0 921 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mpzl2O70255 215 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mterf2Q8BKY8 385 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Kcnk10Q8BUW1 535 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slco1a1Q9QXZ6 670 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ankdd1bQ14DN9 521 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Snx32Q80ZJ7 404 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Prkag3Q8BGM7 489 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc39a11Q8BWY7 342 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 St8sia6Q8K4T1 398 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cnot11Q9CWN7 505 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Snx10Q9CWT3 201 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Nudt5Q9JKX6 218 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Eif2s3xQ9Z0N1 472 aaKnown RBP16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Eif2s3yQ9Z0N2 472 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 PtprtQ99M80 1454 aa16.54■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm35911A0A1D5RLS7 214 aa16.53■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Foxn2E9Q7L6 429 aa16.53■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms