RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Epb41l5Q8BGS1 731 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Cstf2tQ8C7E9 632 aaKnown RBP10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Mab21L3Q8CI17 429 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Gin1Q8K259 518 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Tspan33Q8R3S2 283 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Nol6Q8R5K4 1152 aaKnown RBP10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 NpntQ91V88 561 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Pcdha8Q91Y12 946 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 CtsqQ91ZF4 343 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Cnot11Q9CWN7 505 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Zdhhc13Q9CWU2 622 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Kdm8Q9CXT6 414 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Tmem86aQ9D8N3 241 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Spock2Q9ER58 423 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Dpp7Q9ET22 506 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Pias4Q9JM05 507 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Ap1m2Q9WVP1 423 aa10.3□□□□□ -0.76
Clip3-201ENSMUST00000014065 Atad5Q4QY64 1826 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Vmn2r120E9PX34 856 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Krt83E9Q1Y9 479 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Htr5bP31387 370 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 MtpnP62774 118 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 TgfbiP82198 683 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Hrh2P97292 397 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 SPINDOCQ05AH6 381 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 WhammQ571B6 793 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Smarcd1Q61466 515 aaKnown RBP10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 MafkQ61827 156 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Sox11Q7M6Y2 395 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Clec2eQ80XD9 204 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Mfn1Q811U4 741 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 D3Ertd751eQ8BGN2 192 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Grsf1Q8C5Q4 479 aaKnown RBP10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 KyQ8C8H8 661 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Sept8Q8CHH9 429 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Olfr330Q8VGD9 315 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Olfr532Q8VGT4 309 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Znf24Q91VN1 368 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Unc50Q9CQ61 259 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Mrpl45Q9D0Q7 306 aaKnown RBP10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 4930524N10RikQ9D519 233 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 MajinQ9D992 256 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Pold3Q9EQ28 462 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 NckipsdQ9ESJ4 714 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Smok1Q9QYZ4 484 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Slc2a5Q9WV38 501 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Gsk3bQ9WV60 420 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 S1pr4Q9Z0L1 386 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Alms1Q8K4E0 3251 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Gm12248A0A1W2P8B8 313 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Phf11cB4XVP9 339 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Dthd1E9PZX1 795 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Pgbd1E9Q492 415 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Sgo2bJ3QMK1 1167 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Gm13128L7MU96 475 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Slc11a2P49282 568 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Ufm1P61961 85 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Timm13P62075 95 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Icam5Q60625 917 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Mef2dQ63943 514 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Fndc11Q80WB0 326 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Gtf2a2Q80ZM7 109 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Msantd1Q8BIL2 278 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Parp12Q8BZ20 711 aaKnown RBP10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Ugt2b34Q8K154 532 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 ClmpQ8R373 373 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Cyp4v2Q9DBW0 525 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Isca2Q9DCB8 154 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Mrpl40Q9Z2Q5 206 aa10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.29□□□□□ -0.76
Clip3-201ENSMUST00000014065 Smok4aA0JLX3 433 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Sult2a6B2RVI8 285 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Tmigd3G3X8R9 209 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 1700122O11RikJ3QPW6 241 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Gm10479K7N6H4 105 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Vmn2r88L7N1W8 857 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Alox8O35936 677 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Tuba4aP68368 448 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Cdh9P70407 786 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Pnpla1Q3V1D5 599 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Adamts16Q69Z28 1222 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Mrps35Q8BJZ4 320 aaKnown RBP10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Cacnb2Q8CC27 655 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Mmgt2Q8R3L0 123 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Cant1Q8VCF1 403 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Klrb1fQ8VD98 217 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Ankrd49Q8VE42 238 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Diras1Q91Z61 198 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Trim16Q99PP9 556 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Glod4Q9CPV4 298 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Retreg3Q9CQV4 466 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Chaf1bQ9D0N7 572 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Tmem80Q9D3H0 123 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Ppp1r2Q9DCL8 206 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Il22Q9JJY9 179 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Abhd1Q9QZC8 412 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Tubd1Q9R1K7 455 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Clcn5Q9WVD4 746 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Adgra2Q91ZV8 1336 aa10.28□□□□□ -0.76
Clip3-201ENSMUST00000014065 Lipo4D3Z608 396 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms