RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 NIPAL4Q0D2K0 466 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 TBX2Q13207 712 aaPredicted RBP18.89■□□□□ 0.61
CLN6-221ENST00000637494 EIF3IQ13347 325 aaKnown RBP18.89■□□□□ 0.61
CLN6-221ENST00000637494 TFDP2Q14188 446 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 TCEAL1Q15170 157 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 PTPRRQ15256 657 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 CERCAMQ5T4B2 595 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 IGF2-ASQ6U949 168 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 EXD1Q8NHP7 514 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 ZDHHC1Q8WTX9 485 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 KCNE4Q8WWG9 221 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 RNF25Q96BH1 459 aaPredicted RBP18.89■□□□□ 0.61
CLN6-221ENST00000637494 HIC2Q96JB3 615 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 EPB41L5Q9HCM4 733 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 PKD2L2Q9NZM6 624 aa18.89■□□□□ 0.61
CLN6-221ENST00000637494 URB1O60287 2271 aaKnown RBP18.89■□□□□ 0.61
CLN6-221ENST00000637494 FAM208BQ5VWN6 2430 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 RHPN2P1A8MT19 583 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 D6RAR5 112 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 NUDT21O43809 227 aaKnown RBP18.88■□□□□ 0.61
CLN6-221ENST00000637494 NOBOXO60393 691 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 CLDN7O95471 211 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 COMTP21964 271 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 UCNP55089 124 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 INHBCP55103 352 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 DYNLT1P63172 113 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 SPA17Q15506 151 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 CCDC70Q6NSX1 233 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 CCL4L1Q8NHW4 92 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 SCAMP4Q969E2 229 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 LIN37Q96GY3 246 aaPredicted RBP18.88■□□□□ 0.61
CLN6-221ENST00000637494 NAF1Q96HR8 494 aaKnown RBP18.88■□□□□ 0.61
CLN6-221ENST00000637494 SLC46A1Q96NT5 459 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 LYSMD1Q96S90 227 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 TAAR2Q9P1P5 351 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 RABGEF1Q9UJ41 708 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 SLC17A4Q9Y2C5 497 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 CHD6Q8TD26 2715 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 APC2O95996 2303 aa18.88■□□□□ 0.61
CLN6-221ENST00000637494 A0A0U1RQS6 177 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 RGSL1A5PLK6 1076 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 C3orf70A6NLC5 250 aaPredicted RBP18.87■□□□□ 0.61
CLN6-221ENST00000637494 ANKRD66B4E2M5 251 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 ASMTLO95671 621 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 PRLP01236 227 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 CYLC1P35663 651 aaPredicted RBP18.87■□□□□ 0.61
CLN6-221ENST00000637494 POLD2P49005 469 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 NR2C2P49116 596 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 HLTFQ14527 1009 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLN6-221ENST00000637494 SLC30A9Q6PML9 568 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 NT5DC3Q86UY8 548 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 OR2M4Q96R27 311 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 RIOK2Q9BVS4 552 aaKnown RBP18.87■□□□□ 0.61
CLN6-221ENST00000637494 DPH1Q9BZG8 443 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 ASCL3Q9NQ33 180 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLN6-221ENST00000637494 RNF215Q9Y6U7 377 aa18.87■□□□□ 0.61
CLN6-221ENST00000637494 PSTPIP1O43586 416 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 TNFSF15O95150 251 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 ADCY8P40145 1251 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 ACTR1BP42025 376 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 TNNT3P45378 269 aaPredicted RBP18.86■□□□□ 0.61
CLN6-221ENST00000637494 HADHBP55084 474 aaKnown RBP18.86■□□□□ 0.61
CLN6-221ENST00000637494 ACTR1AP61163 376 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 SKOR1P84550 965 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 CTBSQ01459 385 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 ZBTB17Q13105 803 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 RAB11FIP2Q7L804 512 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 SPRED1Q7Z699 444 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 GALNT13Q8IUC8 556 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 SPACA3Q8IXA5 215 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 FBXO39Q8N4B4 442 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 FCRL3Q96P31 734 aaPredicted RBP18.86■□□□□ 0.61
CLN6-221ENST00000637494 AGAP3Q96P47 875 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 SMIM14Q96QK8 99 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 FAM83DQ9H4H8 585 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 RAD18Q9NS91 495 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 SPATS2LQ9NUQ6 558 aaKnown RBP18.86■□□□□ 0.61
CLN6-221ENST00000637494 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.86■□□□□ 0.61
CLN6-221ENST00000637494 TMEM98Q9Y2Y6 226 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 HYOU1Q9Y4L1 999 aa18.86■□□□□ 0.61
CLN6-221ENST00000637494 A0A1W2PQM1 296 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 PLD2O14939 933 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 INPP4BO15327 924 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 IPO7O95373 1038 aaKnown RBP18.85■□□□□ 0.61
CLN6-221ENST00000637494 FGF1P05230 155 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 MMP2P08253 660 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 JMJD7P0C870 316 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 AK4P27144 223 aaPredicted RBP18.85■□□□□ 0.61
CLN6-221ENST00000637494 CCKBRP32239 447 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 SPINT3P49223 89 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 LRP8Q14114 963 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 QPCTQ16769 361 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 MAP9Q49MG5 647 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 KAZNQ674X7 775 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 MFSD7Q6UXD7 560 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 NPNTQ6UXI9 565 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 RFLNAQ6ZTI6 216 aa18.85■□□□□ 0.61
CLN6-221ENST00000637494 MARK2Q7KZI7 788 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms