RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 LAMB3Q13751 1172 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 TYSND1Q2T9J0 566 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ZFP1Q6P2D0 407 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 C16orf59Q7L2K0 433 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 FUNDC1Q8IVP5 155 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 TRPC4APQ8TEL6 797 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ZNF483Q8TF39 744 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 UNC93B1Q9H1C4 597 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 NLE1Q9NVX2 485 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 BCAP29Q9UHQ4 241 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 MRASO14807 208 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 KDELR3O43731 214 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 SRP72O76094 671 aaKnown RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 IRX1P78414 480 aaPredicted RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 SMARCB1Q12824 385 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ADGRE1Q14246 886 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 TLR1Q15399 786 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 MAPRE2Q15555 327 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ISLR2Q6UXK2 745 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 LINGO4Q6UY18 593 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 LPCAT1Q8NF37 534 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 LPGAT1Q92604 370 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 WBP2Q969T9 261 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ATP6V1E2Q96A05 226 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 ASB9Q96DX5 294 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 TSEN34Q9BSV6 310 aaKnown RBP11.94□□□□□ -0.5
TP53-227ENST00000622645 TTLL2Q9BWV7 592 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 COMMD8Q9NX08 183 aa11.94□□□□□ -0.5
TP53-227ENST00000622645 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 C9JVG2 144 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 PIP5K1BO14986 540 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 NRP2O60462 931 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 DNAJA2O60884 412 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 CLASP2O75122 1294 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 RNASEH2AO75792 299 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 INHAP05111 366 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 IRF1P10914 325 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 CR2P20023 1033 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 CORO1AP31146 461 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 TRIM25Q14258 630 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 GRB7Q14451 532 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 PDK3Q15120 406 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 CYTH1Q15438 398 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 TSNQ15631 228 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 THEMIS2Q5TEJ8 643 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 IL23RQ5VWK5 629 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 APLFQ8IW19 511 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 RHEBL1Q8TAI7 183 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 TWIST2Q8WVJ9 160 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 TSC22D3Q99576 134 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 SLC30A3Q99726 388 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 SLC25A23Q9BV35 468 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 TDRD1Q9BXT4 1180 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 RNF38Q9H0F5 515 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 TFB2MQ9H5Q4 396 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 BPIFA1Q9NP55 256 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 GMPR2Q9P2T1 348 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 AK5Q9Y6K8 562 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 PRSS51A0A1B0GVH4 220 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 NCF1BA6NI72 391 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 NCF1CA8MVU1 366 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 SUPT3HB4E1H0 165 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 CDC7O00311 574 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 AZIN1O14977 448 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 OR1I1O60431 355 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 SUPT3HO75486 399 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 NDUFS3O75489 264 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 STC2O76061 302 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 RHOCP08134 193 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 NCF1P14598 390 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 HOXB8P17481 243 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 ZNF177Q13360 481 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 PTPRNQ16849 979 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 KIF19Q2TAC6 998 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 PITRM1Q5JRX3 1037 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 HECTD3Q5T447 861 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 RAB44Q7Z6P3 723 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 NPAS4Q8IUM7 802 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 DDIASQ8IXT1 998 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 PIANPQ8IYJ0 282 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 DLG3Q92796 817 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 LRCH3Q96II8 777 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 GBP5Q96PP8 586 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 BTBD9Q96Q07 612 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 GPR21Q99679 349 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 TUBB1Q9H4B7 451 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 POPDC3Q9HBV1 291 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 SPAG4Q9NPE6 437 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 SEMA4BQ9NPR2 832 aaPredicted RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 TAS2R13Q9NYV9 303 aa11.93□□□□□ -0.5
TP53-227ENST00000622645 AGO1Q9UL18 857 aaKnown RBP11.93□□□□□ -0.5
TP53-227ENST00000622645 RNF112Q9ULX5 631 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms