RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SLC35B4Q969S0 331 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ERVK-6Q9BXR3 956 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 ERVK-18Q9QC07 812 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 TRPV2Q9Y5S1 764 aa4.95□□□□□ -1.62
VPS13D-213ENST00000613099 BCLAF3A2AJT9 711 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 FPGTO14772 594 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PGRMC2O15173 223 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TPMTP51580 245 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CDK10Q15131 360 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 REEP4Q9H6H4 257 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 NMRAL1Q9HBL8 299 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SDHAF2Q9NX18 166 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CDH7Q9ULB5 785 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CHADO15335 359 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RAB39AQ14964 217 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GPN2Q9H9Y4 310 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 KLHL42Q9P2K6 505 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 LYVE1Q9Y5Y7 322 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 IRAK3Q9Y616 596 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ADGRF5Q8IZF2 1346 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MITFO75030 526 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GDF11O95390 407 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SERPINA3P01011 423 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TFEBP19484 476 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GPD1P21695 349 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PITPNAQ00169 270 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GRB14Q14449 540 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 NPTX1Q15818 432 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 BAK1Q16611 211 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 UBXN11Q5T124 520 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RETREG3Q86VR2 466 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ASB9Q96DX5 294 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 C11orf70Q9BRQ4 267 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RNF6Q9Y252 685 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 C3orf70A6NLC5 250 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PDCD5O14737 125 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RFPL3O75679 317 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TRAPPC2P0DI81 140 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TRAPPC2BP0DI82 140 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 BMP6P22004 513 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 DCKP27707 260 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GTF2H3Q13889 308 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TMEM270Q6UE05 265 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 IZUMO1Q8IYV9 350 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 LRRC47Q8N1G4 583 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 OR52K2Q8NGK3 314 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF671Q8TAW3 534 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ATG4AQ8WYN0 398 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SLC6A17Q9H1V8 727 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ATP8B3O60423 1300 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RRN3P2A6NIE6 340 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CYP1A2P05177 515 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CD36P16671 472 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 DBPQ10586 325 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SMARCB1Q12824 385 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 KLF10Q13118 480 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MPP2Q14168 576 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 UTP15Q8TED0 518 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 KAT5Q92993 513 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 C12orf57Q99622 126 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SH3BP4Q9P0V3 963 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MAGED1Q9Y5V3 778 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ARID1AO14497 2285 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TADA2AO75478 443 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RASAL1O95294 804 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF682O95780 498 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GH1P01241 217 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MAPK1P28482 360 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CHRNA5P30532 468 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 IFNGR2P38484 337 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PIK3CBP42338 1070 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 HLCSP50747 726 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 INHBCP55103 352 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GPAT3Q53EU6 434 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 C16orf86Q6ZW13 317 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ALPK1Q96QP1 1244 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PPIL3Q9H2H8 161 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SPON1Q9HCB6 807 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 EBF1Q9UH73 591 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SLC9A8Q9Y2E8 581 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ATAD5Q96QE3 1844 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SIGLEC1Q9BZZ2 1709 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MYMKA6NI61 221 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 FAM220BPB1ANY3 271 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 KHDRBS3O75525 346 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PROSCO94903 275 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 C9P02748 559 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PROZP22891 400 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MYF6P23409 242 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MAGEA6P43360 314 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 NR2C2P49116 596 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CDH15P55291 814 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 AQP12AQ8IXF9 295 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 OR7G2Q8NG99 324 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 POF1BQ8WVV4 589 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 OPA3Q9H6K4 179 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GAREM1Q9H706 876 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RAP2CQ9Y3L5 183 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MST1RQ04912 1400 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TRAV20A0A0B4J274 112 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms