RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NUFIP1Q9UHK0 495 aaKnown RBP12.56□□□□□ -0.4
CTCFL-218ENST00000608440 TMPRSS11EQ9UL52 423 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 PTPRFP10586 1907 aa12.56□□□□□ -0.4
CTCFL-218ENST00000608440 OR6C70A6NIJ9 312 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 INPP4BO15327 924 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 CHADO15335 359 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 KCNN4O15554 427 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 TRIM13O60858 407 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 GOT2P00505 430 aaKnown RBP12.55□□□□□ -0.4
CTCFL-218ENST00000608440 CCNCP24863 283 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 PSMB9P28065 219 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF33BQ06732 778 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 STX5Q13190 355 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 EFL1Q7Z2Z2 1120 aaKnown RBP12.55□□□□□ -0.4
CTCFL-218ENST00000608440 NRARPQ7Z6K4 114 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 METTL3Q86U44 580 aaKnown RBP12.55□□□□□ -0.4
CTCFL-218ENST00000608440 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 LINC00518Q8N0U6 118 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 BEST2Q8NFU1 509 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 DEDD2Q8WXF8 326 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 BDH2Q9BUT1 245 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 SPON1Q9HCB6 807 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 HPS4Q9NQG7 708 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 SNX15Q9NRS6 342 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 EVA1BQ9NVM1 165 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 MRPL39Q9NYK5 338 aaKnown RBP12.55□□□□□ -0.4
CTCFL-218ENST00000608440 NPAP1Q9NZP6 1156 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 TOR1AO14656 332 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 TSC22D2O75157 780 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 MTHFD1P11586 935 aaKnown RBP12.55□□□□□ -0.4
CTCFL-218ENST00000608440 MSH3P20585 1137 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 IL12RB1P42701 662 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 PSMD8P48556 350 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 ETV1P50549 477 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 DEFA1P59665 94 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 DEFA3P59666 94 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 IRF9Q00978 393 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 TAP1Q03518 808 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 ARSKQ6UWY0 536 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF517Q6ZMY9 492 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-218ENST00000608440 IFNEQ86WN2 208 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 OR9I1Q8NGQ6 314 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 FBXW5Q969U6 566 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 ZHX1-C8orf76Q96EF9 292 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 SEPHS2Q99611 448 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 SMOC2Q9H3U7 446 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 NECTIN3Q9NQS3 549 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 OPTCQ9UBM4 332 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
CTCFL-218ENST00000608440 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
CTCFL-218ENST00000608440 CIB4A0PJX0 185 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 PRR23AA6NEV1 266 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 G3V2L1 256 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 PLD2O14939 933 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 SLC22A2O15244 555 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 CCNE2O96020 404 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 ALDH6A1Q02252 535 aaKnown RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 EMX1Q04741 257 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 AP3B2Q13367 1082 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 BAATQ14032 418 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 RBM48Q5RL73 367 aaKnown RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 C6orf141Q5SZD1 244 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 DNAJC24Q6P3W2 148 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 C8orf59Q8N0T1 100 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 CLEC4FQ8N1N0 589 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 KCTD6Q8NC69 237 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 AGBL3Q8NEM8 1001 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 RORBQ92753 470 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 ASIC4Q96FT7 647 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 EBNA1BP2Q99848 306 aaKnown RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 NUAK2Q9H093 628 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 IFT22Q9H7X7 185 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM181Q9P2C4 612 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 ZNF70Q9UC06 446 aaPredicted RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 BTBD3Q9Y2F9 522 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 RAP2CQ9Y3L5 183 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 MSH4O15457 936 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 PI15O43692 258 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 TGFB3P10600 412 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 KDELR1P24390 212 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 GRK3P35626 688 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 GRIA4P48058 902 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 NAGLUP54802 743 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 GPR85P60893 370 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 MGAT3Q09327 533 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 INCA1Q0VD86 236 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 FASTKQ14296 549 aaKnown RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 SNRNP35Q16560 246 aaKnown RBP12.54□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM65Q6PI78 240 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 TMEM270Q6UE05 265 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 SV2AQ7L0J3 742 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 OR4M2Q8NGB6 313 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 ANKRD49Q8WVL7 239 aa12.54□□□□□ -0.4
CTCFL-218ENST00000608440 LRRC39Q96DD0 335 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms