RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PIK3R2O00459 728 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 PRAMEF10O60809 474 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
SCAF1-202ENST00000595242 GRAP2O75791 330 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 PCDH8O95206 1070 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 CDH6P55285 790 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 SULT2A1Q06520 285 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 DPYSL2Q16555 572 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 RAB6CQ53S08 254 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 CEP85LQ5SZL2 805 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 IZUMO3Q5VZ72 239 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 SLC9A4Q6AI14 798 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 RFX6Q8HWS3 928 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 SIX6OS1Q8N1H7 587 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 CLEC4CQ8WTT0 213 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 HSPH1Q92598 858 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 RAB6CQ9H0N0 254 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCAF1-202ENST00000595242 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCAF1-202ENST00000595242 IPO11Q9UI26 975 aaKnown RBP12.91□□□□□ -0.34
SCAF1-202ENST00000595242 TUBD1Q9UJT1 453 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 ANAPC5Q9UJX4 755 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 ZFR2Q9UPR6 939 aaKnown RBP12.91□□□□□ -0.34
SCAF1-202ENST00000595242 ZNF148Q9UQR1 794 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 ESPL1Q14674 2120 aa12.91□□□□□ -0.34
SCAF1-202ENST00000595242 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 GOLGA6L10A6NI86 522 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 SMAPO00193 183 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 ALOX15BO15296 676 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 RIPK2O43353 540 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 BNIP3LO60238 219 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 MYZAPP0CAP1 466 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 LCP1P13796 627 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 ITIH1P19827 911 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 IL4RP24394 825 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 NOS2P35228 1153 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 ADCY8P40145 1251 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 GYS2P54840 703 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 CCDC15Q0P6D6 951 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 CBLBQ13191 982 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 MORF4L2Q15014 288 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 KCTD19Q17RG1 926 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-202ENST00000595242 SLC25A52Q3SY17 297 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 TUBB8Q3ZCM7 444 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 OTUD1Q5VV17 481 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-202ENST00000595242 DENND2CQ68D51 928 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 HOOK3Q86VS8 718 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 DTX1Q86Y01 620 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 RTP4Q96DX8 246 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 FCRL2Q96LA5 508 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-202ENST00000595242 GFM1Q96RP9 751 aaKnown RBP12.9□□□□□ -0.34
SCAF1-202ENST00000595242 NPY6RQ99463 290 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 SLC12A9Q9BXP2 914 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 CDC42EP4Q9H3Q1 356 aaKnown RBP12.9□□□□□ -0.34
SCAF1-202ENST00000595242 CNGB3Q9NQW8 809 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-202ENST00000595242 PADI4Q9UM07 663 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 SHOC2Q9UQ13 582 aa12.9□□□□□ -0.34
SCAF1-202ENST00000595242 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 D6RAR5 112 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 AGRPO00253 132 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 KPNA3O00505 521 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 GCATO75600 419 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 PECAM1P16284 738 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 CCKBRP32239 447 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 PLK1P53350 603 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 DAOAP59103 153 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 ATP11AP98196 1134 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 DMTNQ08495 405 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 PDE1CQ14123 709 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 DLG2Q15700 870 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 CDO1Q16878 200 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 P3H1Q32P28 736 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 ERMARDQ5T6L9 678 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 RNASEH2BQ5TBB1 312 aaKnown RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 ESRP1Q6NXG1 681 aaKnown RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 KYAT3Q6YP21 454 aaKnown RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 Q6ZVU0 165 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 GSTA5Q7RTV2 222 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 PCGF5Q86SE9 256 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 ATCAYQ86WG3 371 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 LGI2Q8N0V4 545 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 PQLC3Q8N755 202 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 GLIS1Q8NBF1 620 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 BTN2A2Q8WVV5 523 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 IRGQQ8WZA9 623 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 MIB2Q96AX9 1013 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 TLCD1Q96CP7 247 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 PGAP3Q96FM1 320 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 PGM2Q96G03 612 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 SLC17A9Q9BYT1 436 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 ZNF71Q9NQZ8 489 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-202ENST00000595242 FOXJ2Q9P0K8 574 aa12.89□□□□□ -0.35
SCAF1-202ENST00000595242 SPASTQ9UBP0 616 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms