RNA–Protein interactions for RNA: ENST00000584130.1

RIOK3-209, Transcript of RIO kinase 3, human

TSL 4

Gene RIOK3, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-209	ENST00000584130	DDN	O94850	711 aa	Predicted RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	CLDN14	O95500	239 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	FCGR1A	P12314	374 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	DDX5	P17844	614 aa	Known RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	GARS	P41250	739 aa	Known RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	DRG2	P55039	364 aa	Known RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	HNRNPH2	P55795	449 aa	Known RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	DSCR9	P59020	149 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	ZXDB	P98169	803 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	LRIF1	Q5T3J3	769 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	ITPRIPL1	Q6GPH6	555 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	ZNF280D	Q6N043	979 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	SEPT14	Q6ZU15	432 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	BEST3	Q8N1M1	668 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	SMRP1	Q8NCR6	262 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	OR2AK2	Q8NG84	335 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	WFIKKN2	Q8TEU8	576 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	SCFD2	Q8WU76	684 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	SH3GL2	Q99962	352 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	KAT14	Q9H8E8	782 aa		4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	SEBOX	Q9HB31	216 aa	Predicted RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	LAS1L	Q9Y4W2	734 aa	Known RBP	4.63	□□□□□ -1.67
RIOK3-209	ENST00000584130	LACTBL1	A8MY62	500 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GTPBP1	O00178	669 aa	Known RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	AP3D1	O14617	1153 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SCAMP1	O15126	338 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	NDUFS3	O75489	264 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	JRK	O75564	520 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GAGE7	O76087	117 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	KDM4B	O94953	1096 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	PPP1R3D	O95685	299 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GAGE12F	P0CL80	117 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GAGE12G	P0CL81	117 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GAGE12I	P0CL82	117 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	HOXD13	P35453	343 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GALC	P54803	685 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SEC61A1	P61619	476 aa	Known RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	KIF5A	Q12840	1032 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GAGE1	Q13065	139 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GAGE4	Q13068	117 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	OASL	Q15646	514 aa	Known RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	HLF	Q16534	295 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	PMS2CL	Q68D20	193 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	JADE1	Q6IE81	842 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	DUS1L	Q6P1R4	473 aa	Known RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	PDXDC1	Q6P996	788 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SARM1	Q6SZW1	724 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	CHST9	Q7L1S5	443 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	RBM23	Q86U06	439 aa	Known RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	HJURP	Q8NCD3	748 aa	Predicted RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SPATA22	Q8NHS9	363 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SPATA3	Q8NHX4	192 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	HMGCLL1	Q8TB92	370 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	NUDCD2	Q8WVJ2	157 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SGCD	Q92629	289 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	HARBI1	Q96MB7	349 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SEPT5	Q99719	369 aa	Predicted RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SDF4	Q9BRK5	362 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	GAREM1	Q9H706	876 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	SETD4	Q9NVD3	440 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	C1RL	Q9NZP8	487 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	MTMR6	Q9Y217	621 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	CLIC4	Q9Y696	253 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	NFS1	Q9Y697	457 aa		4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	RSF1	Q96T23	1441 aa	Predicted RBP	4.62	□□□□□ -1.67
RIOK3-209	ENST00000584130	IGLV5-37	A0A075B6J1	123 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130		A6NCN8	305 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	AGAP14	A8MT82	685 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	ATP2A1	O14983	1001 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	VILL	O15195	856 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	GFPT2	O94808	682 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	PAPSS2	O95340	614 aa	Predicted RBP	4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	ZBTB11	O95625	1053 aa	Predicted RBP	4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	EGF	P01133	1207 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	AFP	P02771	609 aa	Known RBP	4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	SRC	P12931	536 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	GABRB1	P18505	474 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	BDKRB2	P30411	391 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	HOXC9	P31274	260 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	CASP2	P42575	452 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	CDH8	P55286	799 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	SEC61B	P60468	96 aa	Known RBP	4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	TUBA1B	P68363	451 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	CSNK2A1	P68400	391 aa	Predicted RBP	4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	PRAME	P78395	509 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	ZNF155	Q12901	538 aa	Predicted RBP	4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	GRIK2	Q13002	908 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	IRF3	Q14653	427 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	CRYM	Q14894	314 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	NAB2	Q15742	525 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	ADIPOQ	Q15848	244 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	CTF1	Q16619	201 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	MEA1	Q16626	185 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	ASTE1	Q2TB18	679 aa	Predicted RBP	4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	ATP13A5	Q4VNC0	1218 aa		4.61	□□□□□ -1.67
RIOK3-209	ENST00000584130	TMED8	Q6PL24	325 aa	Predicted RBP	4.61	□□□□□ -1.67

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