RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SRPK1Q96SB4 655 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 LRRC1Q9BTT6 524 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 WRAP53Q9BUR4 548 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 SLC17A9Q9BYT1 436 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 CPEB1Q9BZB8 566 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 FOXP3Q9BZS1 431 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 XAB2Q9HCS7 855 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 MTRF1LQ9UGC7 380 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 RPL26L1Q9UNX3 145 aaKnown RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 LHX6Q9UPM6 363 aa11.87□□□□□ -0.51
NDE1-206ENST00000572967 ARID1BQ8NFD5 2236 aaPredicted RBP11.87□□□□□ -0.51
NDE1-206ENST00000572967 TRABD2BA6NFA1 517 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 DNALI1O14645 258 aaPredicted RBP11.86□□□□□ -0.51
NDE1-206ENST00000572967 AP2A1O95782 977 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 EPOP01588 193 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 MYF5P13349 255 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 CKMT2P17540 419 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 CR2P20023 1033 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 HLA-DPA1P20036 260 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 XPAP23025 273 aaPredicted RBP11.86□□□□□ -0.51
NDE1-206ENST00000572967 CD86P42081 329 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 MAGEA6P43360 314 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 RABIFP47224 123 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 SUOXP51687 545 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 EPHB1P54762 984 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 MAXP61244 160 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 POLR2LP62875 67 aaKnown RBP11.86□□□□□ -0.51
NDE1-206ENST00000572967 DSC2Q02487 901 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 GUCY2DQ02846 1103 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 CYP4F3Q08477 520 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 SGCGQ13326 291 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 CAMK2BQ13554 666 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 LAMB3Q13751 1172 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 FZD2Q14332 565 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 TRIP13Q15645 432 aaPredicted RBP11.86□□□□□ -0.51
NDE1-206ENST00000572967 ARMC12Q5T9G4 340 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 IZUMO3Q5VZ72 239 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 ARMC3Q5W041 872 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 BRAT1Q6PJG6 821 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 C19orf48Q6RUI8 117 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 PARGQ86W56 976 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 TMPRSS12Q86WS5 348 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 SLC25A45Q8N413 288 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 EIF1ADQ8N9N8 165 aaKnown RBP11.86□□□□□ -0.51
NDE1-206ENST00000572967 ZNF548Q8NEK5 533 aaPredicted RBP11.86□□□□□ -0.51
NDE1-206ENST00000572967 OR4C6Q8NH72 309 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 HCAR2Q8TDS4 363 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 CXorf40AQ8TE69 158 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 RAB7BQ96AH8 199 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 NXPE2Q96DL1 559 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 BMFQ96LC9 184 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 KLF6Q99612 283 aaPredicted RBP11.86□□□□□ -0.51
NDE1-206ENST00000572967 TRIM51Q9BSJ1 452 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 NOD2Q9HC29 1040 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 GPR27Q9NS67 375 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 COQ6Q9Y2Z9 468 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 NEU2Q9Y3R4 380 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 CEP295Q9C0D2 2601 aa11.86□□□□□ -0.51
NDE1-206ENST00000572967 ZFHX4Q86UP3 3567 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 GOLGA4Q13439 2230 aaKnown RBP11.85□□□□□ -0.51
NDE1-206ENST00000572967 H3BM21 787 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 FPGTO14772 594 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 TSPAN6O43657 245 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 MMP20O60882 483 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 SEC31AO94979 1220 aaKnown RBP11.85□□□□□ -0.51
NDE1-206ENST00000572967 PRKCGP05129 697 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 FGF1P05230 155 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 RHOXF2BP0C7M4 288 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 ZSCAN5DPP0CG00 497 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 JUPP14923 745 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 CD68P34810 354 aaPredicted RBP11.85□□□□□ -0.51
NDE1-206ENST00000572967 WNT3AP56704 352 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 CDK18Q07002 472 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 HLTFQ14527 1009 aaKnown RBP eCLIP11.85□□□□□ -0.51
NDE1-206ENST00000572967 IRF4Q15306 451 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 TCEA2Q15560 299 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 DNAJC21Q5F1R6 531 aaKnown RBP11.85□□□□□ -0.51
NDE1-206ENST00000572967 DUPD1Q68J44 220 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 KLHDC8BQ8IXV7 354 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 RBFAQ8N0V3 343 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 PGBD5Q8N414 524 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 MCUQ8NE86 351 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 DENND6BQ8NEG7 585 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 IPMKQ8NFU5 416 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 ARRDC2Q8TBH0 407 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 RBM15Q96T37 977 aaKnown RBP eCLIP11.85□□□□□ -0.514e-6■■■■□ 20.7
NDE1-206ENST00000572967 TBL1YQ9BQ87 522 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 RHOXF2Q9BQY4 288 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 TDRD1Q9BXT4 1180 aaKnown RBP11.85□□□□□ -0.51
NDE1-206ENST00000572967 TRIM31Q9BZY9 425 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 PHACTR1Q9C0D0 580 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 ETNK1Q9HBU6 452 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 NLGN3Q9NZ94 848 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 DKK3Q9UBP4 350 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 ANAPC5Q9UJX4 755 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 GPSM3Q9Y4H4 160 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 RAI2Q9Y5P3 530 aa11.85□□□□□ -0.51
NDE1-206ENST00000572967 ASPMQ8IZT6 3477 aa11.84□□□□□ -0.51
NDE1-206ENST00000572967 WDFY3Q8IZQ1 3526 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms