RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PDE2AO00408 941 aaPredicted RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 PPP1R12AO14974 1030 aaPredicted RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 SPOPO43791 374 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 USP12O75317 370 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 CLDN7O95471 211 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 KRT10P13645 584 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 HOXB3P14651 431 aaPredicted RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 NFKBIAP25963 317 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 PTPN3P26045 913 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 ITPKBP27987 946 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 LSSP48449 732 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 POLD2P49005 469 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 ZNF75DP51815 510 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 DYNLT1P63172 113 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 ITKQ08881 620 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 WASHC5Q12768 1159 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 ARHGEF7Q14155 803 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 GALNT3Q14435 633 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 NR1D2Q14995 579 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 PDK1Q15118 436 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 C14orf28Q4W4Y0 310 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 HENMT1Q5T8I9 393 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 SPOCD1Q6ZMY3 1216 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 B4GALNT4Q76KP1 1039 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 TMPRSS9Q7Z410 1059 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 SPRED1Q7Z699 444 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 TAF8Q7Z7C8 310 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 NLRP8Q86W28 1048 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 GAS2L3Q86XJ1 694 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 RFX6Q8HWS3 928 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 RAVER1Q8IY67 606 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 CCDC170Q8IYT3 715 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 KATNAL2Q8IYT4 538 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 CCNYQ8ND76 341 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 WDR48Q8TAF3 677 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 HNRNPLLQ8WVV9 542 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 KRT35Q92764 455 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 GLMNQ92990 594 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 AP2M1Q96CW1 435 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 HERPUD2Q9BSE4 406 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 ABCG4Q9H172 646 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 POLR1BQ9H9Y6 1135 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 CARS2Q9HA77 564 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 SPATS2LQ9NUQ6 558 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 DDX56Q9NY93 547 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 NFKBIL1Q9UBC1 381 aaPredicted RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 SAE1Q9UBE0 346 aaPredicted RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 GULP1Q9UBP9 304 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 DNPEPQ9ULA0 475 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 CNOT6Q9ULM6 557 aaKnown RBP7.79□□□□□ -1.16
CDH3-209ENST00000569080 DOLKQ9UPQ8 538 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 SATB2Q9UPW6 733 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 PCDHGA8Q9Y5G5 932 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 ALG6Q9Y672 507 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 AK5Q9Y6K8 562 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 RNF215Q9Y6U7 377 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 BSNQ9UPA5 3926 aa7.79□□□□□ -1.16
CDH3-209ENST00000569080 C1orf232A0A0U1RR37 186 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 CDRT15L2A8MXV6 281 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 B4DGG1 531 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 ANKRD66B4E2M5 251 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 NUDT21O43809 227 aaKnown RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 DNAJC6O75061 913 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 FGF1P05230 155 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 RPLP0P05388 317 aaKnown RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 PNLIPP16233 465 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 GLB1P16278 677 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 ZFXP17010 805 aaPredicted RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 CA4P22748 312 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 AK4P27144 223 aaPredicted RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 CCKBRP32239 447 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 CD68P34810 354 aaPredicted RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 ADCY8P40145 1251 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 MAGEA1P43355 309 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 ABCG1P45844 678 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 GPR1P46091 355 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 GNPDA1P46926 289 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 SPINT3P49223 89 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 EPHB1P54762 984 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 MAZP56270 477 aaKnown RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 DCDC1P59894 354 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 ERVPABLB-1P60509 514 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 CCL7P80098 99 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 TLE3Q04726 772 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 AP1B1Q10567 949 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 SPIDRQ14159 915 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 LLGL1Q15334 1064 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 C3orf38Q5JPI3 329 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 ZFYVE27Q5T4F4 411 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 RAD9BQ6WBX8 426 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 CLEC14AQ86T13 490 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 TMEM139Q8IV31 216 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 SPACA3Q8IXA5 215 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 NRSN1Q8IZ57 195 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 FAM46DQ8NEK8 389 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms